Variant report

Variant	rs72638116
Chromosome Location	chr8:70009889-70009890
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:2)

rs_ID	r²[population]
rs72654078	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72709933	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031633	chr8:69766575-70322790	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:70000400-70011200	Weak transcription	HSMM	muscle
2	chr8:70008800-70010200	Enhancers	Muscle Satellite Cultured Cells	--
3	chr8:70008800-70010600	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr8:70008800-70011600	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr8:70009200-70010000	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
6	chr8:70009200-70011800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
7	chr8:70009400-70010000	Enhancers	Colon Smooth Muscle	Colon
8	chr8:70009400-70010200	Enhancers	Rectal Smooth Muscle	rectum
9	chr8:70009600-70011000	Weak transcription	Osteobl	bone
10	chr8:70009800-70010200	Weak transcription	Aorta	Aorta
11	chr8:70009800-70011000	Weak transcription	NHDF-Ad	bronchial
12	chr8:70009800-70014000	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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