Variant report

Variant	rs72654078
Chromosome Location	chr8:70100202-70100203
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs72638116	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1031633	chr8:69766575-70322790	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:70091000-70105000	Weak transcription	Aorta	Aorta
2	chr8:70093800-70102800	Weak transcription	Muscle Satellite Cultured Cells	--
3	chr8:70097200-70104400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr8:70097400-70102600	Weak transcription	NHDF-Ad	bronchial
5	chr8:70097400-70102600	Weak transcription	Osteobl	bone
6	chr8:70099400-70101600	Weak transcription	Placenta Amnion	Placenta Amnion
7	chr8:70099600-70100600	Weak transcription	HUES6 Cell Line	embryonic stem cell
8	chr8:70100200-70101000	Enhancers	HUES64 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links