Variant report

Variant	rs72646156
Chromosome Location	chr1:90674758-90674759
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs17130996	0.96[ASN][1000 genomes]
rs60740905	0.94[AMR][1000 genomes];0.98[ASN][1000 genomes]
rs6687644	0.98[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv830570	chr1:90525215-90685526	Bivalent Enhancer Flanking Active TSS Active TSS Weak transcription Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:90673600-90675000	Enhancers	HUES48 Cell Line	embryonic stem cell
2	chr1:90674200-90675000	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr1:90674200-90675200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr1:90674200-90675200	Enhancers	Brain Germinal Matrix	brain
5	chr1:90674600-90676200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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