Variant report

Variant	rs72660327
Chromosome Location	chr8:58819716-58819717
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 6 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs10086387	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16922796	1.00[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs28521185	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6982954	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7820575	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv831323	chr8:58692548-58849862	Active TSS Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:58817000-58820200	Enhancers	NHDF-Ad	bronchial
2	chr8:58818200-58824400	Weak transcription	Fetal Stomach	stomach
3	chr8:58819400-58820000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links