Variant report

Variant	rs72663843
Chromosome Location	chr8:64373167-64373168
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10111839	0.82[ASN][1000 genomes]
rs10113822	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs12334697	0.90[ASN][1000 genomes]
rs1367811	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17211259	0.83[AFR][1000 genomes];0.90[EUR][1000 genomes]
rs2060103	0.82[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs28415720	0.80[ASN][1000 genomes]
rs28558511	0.83[ASN][1000 genomes]
rs55685837	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs55867927	0.80[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72661779	0.82[ASN][1000 genomes]
rs7463090	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890967	chr8:64107847-64454446	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases
2	esv3442250	chr8:64372798-64374746	ZNF genes & repeats Weak transcription Enhancers	TF binding region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64371800-64375000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr8:64372800-64373200	Enhancers	Skeletal Muscle Male	skeletal muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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