Variant report

Variant	rs72663874
Chromosome Location	chr8:64426573-64426574
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs61739457	1.00[EUR][1000 genomes]
rs62511467	1.00[EUR][1000 genomes]
rs72663828	0.91[EUR][1000 genomes]
rs72663834	0.91[EUR][1000 genomes]
rs72663840	0.91[EUR][1000 genomes]
rs72663855	1.00[EUR][1000 genomes]
rs72663857	1.00[EUR][1000 genomes]
rs72663861	1.00[EUR][1000 genomes]
rs72663862	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72663868	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv890967	chr8:64107847-64454446	Weak transcription Active TSS Enhancers Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:64409400-64428000	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr8:64409600-64428000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr8:64423400-64426600	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr8:64424400-64428000	Weak transcription	Fetal Brain Male	brain
5	chr8:64426200-64427000	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr8:64426200-64427000	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr8:64426400-64426600	Weak transcription	iPS-15b Cell Line	embryonic stem cell
8	chr8:64426400-64427200	Enhancers	H1 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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