Variant report
Variant | rs72668810 |
---|---|
Chromosome Location | chr4:121054557-121054558 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
No data |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10446729 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs10446730 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs11777 | 1.00[AFR][1000 genomes] |
rs1526330 | 1.00[AFR][1000 genomes] |
rs61752609 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs61752610 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.84[EUR][1000 genomes] |
rs6821789 | 1.00[AFR][1000 genomes] |
rs6833927 | 1.00[AFR][1000 genomes] |
rs72668809 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
rs72668812 | 1.00[AFR][1000 genomes];0.82[AMR][1000 genomes] |
rs72668814 | 1.00[AFR][1000 genomes] |
rs72668820 | 1.00[AFR][1000 genomes] |
rs72668821 | 1.00[AFR][1000 genomes] |
rs72668824 | 1.00[AFR][1000 genomes] |
rs72668829 | 1.00[AFR][1000 genomes] |
rs72668830 | 1.00[AFR][1000 genomes] |
rs72668835 | 1.00[AFR][1000 genomes] |
rs72668836 | 1.00[AFR][1000 genomes] |
rs72668838 | 1.00[AFR][1000 genomes] |
rs72668839 | 1.00[AFR][1000 genomes] |
rs72668840 | 1.00[AFR][1000 genomes] |
rs72668859 | 1.00[AFR][1000 genomes] |
rs72668868 | 1.00[AFR][1000 genomes] |
rs72668872 | 1.00[AFR][1000 genomes] |
rs72668874 | 1.00[AFR][1000 genomes] |
rs72668875 | 1.00[AFR][1000 genomes] |
rs72668898 | 1.00[AFR][1000 genomes] |
rs72668899 | 1.00[AFR][1000 genomes] |
rs72668902 | 1.00[AFR][1000 genomes] |
rs72670409 | 1.00[AFR][1000 genomes] |
rs72670410 | 1.00[AFR][1000 genomes] |
rs72670412 | 1.00[AFR][1000 genomes] |
rs72670414 | 1.00[AFR][1000 genomes] |
rs72670415 | 1.00[AFR][1000 genomes] |
rs72670416 | 1.00[AFR][1000 genomes] |
rs72670420 | 1.00[AFR][1000 genomes] |
rs72670421 | 1.00[AFR][1000 genomes] |
rs72670425 | 1.00[AFR][1000 genomes] |
rs72670427 | 1.00[AFR][1000 genomes] |
rs72670428 | 1.00[AFR][1000 genomes] |
rs72670431 | 1.00[AFR][1000 genomes] |
rs72670444 | 1.00[AFR][1000 genomes] |
rs72670447 | 1.00[AFR][1000 genomes] |
rs72670460 | 1.00[AFR][1000 genomes] |
rs72670461 | 1.00[AFR][1000 genomes] |
rs72670464 | 1.00[AFR][1000 genomes] |
rs72670466 | 1.00[AFR][1000 genomes] |
rs72670477 | 1.00[AFR][1000 genomes] |
rs72686517 | 1.00[AFR][1000 genomes] |
rs72686518 | 1.00[AFR][1000 genomes] |
rs72686524 | 1.00[AFR][1000 genomes] |
rs72686526 | 1.00[AFR][1000 genomes] |
rs72686529 | 1.00[AFR][1000 genomes] |
rs72686533 | 0.83[AMR][1000 genomes] |
rs72686534 | 1.00[AFR][1000 genomes] |
rs72686538 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs72686541 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs72686542 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs72686543 | 1.00[AFR][1000 genomes];0.94[AMR][1000 genomes];0.88[EUR][1000 genomes] |
rs72686544 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs72686546 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs72686547 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs72686550 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs72686552 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.93[EUR][1000 genomes] |
rs7662162 | 1.00[AFR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv532739 | chr4:120392824-121098103 | Enhancers Flanking Active TSS Strong transcription Weak transcription Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' | TF binding regionCpG islandChromatin interactive regionlncRNA | 33 gene(s) | inside rSNPs | diseases |
2 | nsv1007641 | chr4:120884220-121555889 | Strong transcription Active TSS Enhancers Flanking Active TSS Genic enhancers Weak transcription Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 24 gene(s) | inside rSNPs | diseases |
3 | nsv537234 | chr4:120884220-121555889 | Enhancers Weak transcription Genic enhancers Active TSS Flanking Active TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNA | 24 gene(s) | inside rSNPs | diseases |
4 | esv1845528 | chr4:121034480-121185834 | Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS | Chromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr4:121052800-121054600 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
2 | chr4:121054200-121054600 | Enhancers | Primary monocytes fromperipheralblood | blood |
3 | chr4:121054200-121054800 | Enhancers | Monocytes-CD14+_RO01746 | blood |
4 | chr4:121054400-121061600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |