Variant report

Variant	rs72670747
Chromosome Location	chr14:48015641-48015642
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10483568	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs12433991	0.86[EUR][1000 genomes]
rs12436176	0.86[EUR][1000 genomes]
rs17684860	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs17745673	0.86[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs17746124	0.86[EUR][1000 genomes]
rs72670711	0.95[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72685862	0.80[EUR][1000 genomes]
rs72687639	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv498118	chr14:47754197-48274409	Enhancers Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
2	nsv901894	chr14:47975761-48041708	Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:48005800-48018800	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr14:48011800-48016400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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