The 2.0 version of rSNPBase

Variant report

Variant rs7268001
Chromosome Location chr20:10844012-10844013
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:10830000-10845000 Weak transcription Spleen Spleen
2 chr20:10838200-10844800 Weak transcription Colonic Mucosa Colon
3 chr20:10838400-10845000 Weak transcription Lung lung
4 chr20:10838600-10844600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr20:10839400-10844800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr20:10841000-10844600 Enhancers Hela-S3 cervix
7 chr20:10841200-10844400 Enhancers Rectal Mucosa Donor 31 rectum
8 chr20:10842000-10844600 Enhancers HUVEC blood vessel
9 chr20:10842200-10844800 Enhancers Stomach Mucosa stomach
10 chr20:10842400-10844600 Weak transcription Monocytes-CD14+_RO01746 blood
11 chr20:10842600-10844600 Weak transcription Primary monocytes fromperipheralblood blood
12 chr20:10842800-10844400 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr20:10842800-10844800 Weak transcription Fetal Intestine Small intestine
14 chr20:10842800-10844800 Weak transcription HepG2 liver
15 chr20:10843200-10844400 Enhancers A549 lung
16 chr20:10843200-10844600 Enhancers Duodenum Smooth Muscle Duodenum
17 chr20:10843400-10844600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
18 chr20:10843400-10844800 Enhancers Duodenum Mucosa Duodenum
19 chr20:10843400-10845200 Enhancers NH-A brain
20 chr20:10843400-10846000 Enhancers Fetal Stomach stomach
21 chr20:10843600-10844200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr20:10843600-10844200 Enhancers Esophagus oesophagus
23 chr20:10843600-10844400 Enhancers Aorta Aorta
24 chr20:10843600-10844400 Enhancers Left Ventricle heart
25 chr20:10843600-10844600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
26 chr20:10843600-10844600 Enhancers Rectal Mucosa Donor 29 rectum
27 chr20:10843600-10844600 Enhancers NHDF-Ad bronchial
28 chr20:10843600-10844600 Enhancers NHEK skin
29 chr20:10843600-10844800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr20:10843600-10844800 Enhancers Rectal Smooth Muscle rectum
31 chr20:10843600-10845400 Enhancers Colon Smooth Muscle Colon
32 chr20:10843600-10845600 Enhancers Right Atrium heart
33 chr20:10843600-10845800 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
34 chr20:10843600-10846000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr20:10843600-10846400 Enhancers Pancreas Pancrea
36 chr20:10843600-10847000 Enhancers Sigmoid Colon Sigmoid Colon
37 chr20:10843800-10844200 Enhancers Fetal Kidney kidney
38 chr20:10843800-10844400 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr20:10843800-10844600 Enhancers Muscle Satellite Cultured Cells --
40 chr20:10843800-10844600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
41 chr20:10843800-10844600 Enhancers Adipose Nuclei Adipose
42 chr20:10843800-10844600 Enhancers Stomach Smooth Muscle stomach
43 chr20:10843800-10844600 Enhancers HSMM muscle
44 chr20:10843800-10844600 Enhancers Osteobl bone
45 chr20:10843800-10845000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
46 chr20:10843800-10845000 Enhancers Skeletal Muscle Male skeletal muscle
47 chr20:10843800-10845400 Enhancers Skeletal Muscle Female skeletal muscle
48 chr20:10843800-10845600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
49 chr20:10843800-10845600 Enhancers HMEC breast
50 chr20:10843800-10846400 Enhancers NHLF lung

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Last update: Aug 31, 2015