Variant report

Variant	rs72682006
Chromosome Location	chr8:115092708-115092709
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs10505212	1.00[ASN][1000 genomes]
rs1473984	1.00[ASN][1000 genomes]
rs17631764	0.83[ASN][1000 genomes]
rs17631819	0.83[ASN][1000 genomes]
rs17706095	1.00[ASN][1000 genomes]
rs2176118	1.00[ASN][1000 genomes]
rs3897772	0.88[EUR][1000 genomes]
rs4358830	0.85[AFR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4876564	1.00[ASN][1000 genomes]
rs62540560	1.00[ASN][1000 genomes]
rs62542889	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs62542890	0.83[ASN][1000 genomes]
rs62544298	1.00[ASN][1000 genomes]
rs62544300	1.00[ASN][1000 genomes]
rs72679635	1.00[ASN][1000 genomes]
rs72679654	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72679669	1.00[ASN][1000 genomes]
rs72679700	0.83[ASN][1000 genomes]
rs72679701	0.83[ASN][1000 genomes]
rs72679702	0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs72682010	0.83[ASN][1000 genomes]
rs72682011	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72682012	0.83[ASN][1000 genomes]
rs72682015	0.83[ASN][1000 genomes]
rs72682019	0.83[ASN][1000 genomes]
rs72682020	0.83[ASN][1000 genomes]
rs72682026	0.83[ASN][1000 genomes]
rs72682027	0.83[ASN][1000 genomes]
rs72682029	0.83[ASN][1000 genomes]
rs72682037	0.83[ASN][1000 genomes]
rs72682043	0.83[ASN][1000 genomes]
rs72682047	0.83[ASN][1000 genomes]
rs72684126	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:17 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv818650	chr8:114574863-115477600	Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	esv2758168	chr8:114575703-115321957	Enhancers Transcr. at gene 5' and 3' Weak transcription Genic enhancers Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	esv2759636	chr8:114575703-115321957	Active TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Active TSS Strong transcription Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
4	nsv891340	chr8:114828429-115445405	Enhancers Weak transcription Strong transcription Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
5	esv2757286	chr8:114885432-115211172	Active TSS Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
6	nsv429934	chr8:114933824-115146824	Enhancers Active TSS Weak transcription Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
7	nsv891345	chr8:114956591-115118818	Active TSS Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
8	nsv611961	chr8:115027676-115200723	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
9	nsv1015766	chr8:115040528-115164936	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
10	nsv539725	chr8:115040528-115164936	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	nsv891347	chr8:115041135-115118818	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
12	nsv1016070	chr8:115063598-115193183	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Bivalent Enhancer Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
13	nsv611963	chr8:115068851-115184664	Weak transcription Enhancers Active TSS ZNF genes & repeats Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
14	nsv891348	chr8:115070619-115141771	Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
15	nsv891349	chr8:115074574-115127202	Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
16	nsv891350	chr8:115088243-115171628	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv3412015	chr8:115089376-115093474	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:115091000-115096200	Weak transcription	Dnd41	blood

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