The 2.0 version of rSNPBase

Variant report

Variant rs72685315
Chromosome Location chr1:78292909-78292910
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:110 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78252200-78315800 Weak transcription Esophagus oesophagus
2 chr1:78266000-78298000 Weak transcription K562 blood
3 chr1:78266200-78299200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr1:78266200-78299200 Weak transcription Pancreas Pancrea
5 chr1:78273600-78293200 Weak transcription Brain Germinal Matrix brain
6 chr1:78274800-78297400 Weak transcription Brain Substantia Nigra brain
7 chr1:78274800-78297600 Weak transcription Rectal Smooth Muscle rectum
8 chr1:78274800-78298000 Weak transcription Fetal Kidney kidney
9 chr1:78275000-78312800 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr1:78279200-78300400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:78279800-78294800 Weak transcription H9 Cell Line embryonic stem cell
12 chr1:78280400-78297400 Weak transcription Colon Smooth Muscle Colon
13 chr1:78280600-78298000 Weak transcription Fetal Brain Male brain
14 chr1:78280600-78325600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
15 chr1:78281000-78296600 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:78281000-78308800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr1:78281200-78316400 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:78281600-78297600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:78282800-78293600 Strong transcription Dnd41 blood
20 chr1:78282800-78353400 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr1:78283200-78296600 Weak transcription Right Ventricle heart
22 chr1:78283600-78295000 Weak transcription Left Ventricle heart
23 chr1:78284400-78297400 Weak transcription Brain Cingulate Gyrus brain
24 chr1:78284400-78303200 Weak transcription Rectal Mucosa Donor 29 rectum
25 chr1:78284600-78333000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
26 chr1:78284800-78297800 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr1:78285000-78310200 Weak transcription Primary neutrophils fromperipheralblood blood
28 chr1:78285200-78295000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
29 chr1:78285600-78332000 Weak transcription Spleen Spleen
30 chr1:78285800-78298000 Weak transcription Brain Anterior Caudate brain
31 chr1:78285800-78308800 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr1:78286400-78296400 Weak transcription Primary T cells from cord blood blood
33 chr1:78286400-78298000 Weak transcription GM12878-XiMat blood
34 chr1:78286400-78298200 Weak transcription Colonic Mucosa Colon
35 chr1:78286400-78333200 Weak transcription Rectal Mucosa Donor 31 rectum
36 chr1:78286600-78312800 Weak transcription Thymus Thymus
37 chr1:78286600-78328400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr1:78287400-78310800 Weak transcription HUES6 Cell Line embryonic stem cell
39 chr1:78288000-78298000 Weak transcription Primary hematopoietic stem cells blood
40 chr1:78288200-78298000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
41 chr1:78288200-78299400 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr1:78288200-78309000 Weak transcription Duodenum Mucosa Duodenum
43 chr1:78289400-78298000 Weak transcription Fetal Brain Female brain
44 chr1:78289600-78293000 Weak transcription Fetal Thymus thymus
45 chr1:78289600-78293800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr1:78290000-78296600 Weak transcription Primary B cells from cord blood blood
47 chr1:78290000-78298000 Weak transcription A549 lung
48 chr1:78290200-78294400 Weak transcription Ovary ovary
49 chr1:78290200-78295600 Weak transcription Duodenum Smooth Muscle Duodenum
50 chr1:78290200-78295800 Weak transcription Primary T helper cells fromperipheralblood blood

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Last update: Aug 31, 2015