The 2.0 version of rSNPBase

Variant report

Variant rs72685378
Chromosome Location chr1:78459507-78459508
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:102 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78446000-78461000 Weak transcription Placenta Placenta
2 chr1:78446200-78461200 Weak transcription Fetal Stomach stomach
3 chr1:78446200-78469600 Weak transcription Thymus Thymus
4 chr1:78446400-78469800 Weak transcription Primary B cells from peripheral blood blood
5 chr1:78446400-78470200 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:78446600-78460800 Weak transcription Stomach Smooth Muscle stomach
7 chr1:78446600-78461200 Weak transcription Rectal Mucosa Donor 29 rectum
8 chr1:78446600-78468000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
9 chr1:78446600-78468400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr1:78446600-78468800 Weak transcription Primary hematopoietic stem cells blood
11 chr1:78446600-78468800 Weak transcription Adipose Nuclei Adipose
12 chr1:78446600-78468800 Weak transcription Monocytes-CD14+_RO01746 blood
13 chr1:78446600-78469000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
14 chr1:78446600-78469000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
15 chr1:78446600-78469000 Weak transcription Fetal Kidney kidney
16 chr1:78446600-78469600 Weak transcription Aorta Aorta
17 chr1:78446600-78469800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr1:78446600-78470200 Weak transcription H1 Cell Line embryonic stem cell
19 chr1:78446600-78470400 Weak transcription H9 Cell Line embryonic stem cell
20 chr1:78446800-78460000 Weak transcription Brain Germinal Matrix brain
21 chr1:78446800-78468000 Weak transcription Fetal Lung lung
22 chr1:78447000-78467800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:78447200-78459800 Weak transcription Brain Inferior Temporal Lobe brain
24 chr1:78447200-78461000 Weak transcription Primary T helper cells fromperipheralblood blood
25 chr1:78447200-78463600 Weak transcription Lung lung
26 chr1:78447400-78465800 Weak transcription Hela-S3 cervix
27 chr1:78447600-78469800 Weak transcription Brain Cingulate Gyrus brain
28 chr1:78447600-78470200 Weak transcription Fetal Brain Male brain
29 chr1:78447800-78469600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr1:78448000-78459600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:78448000-78467800 Weak transcription Dnd41 blood
32 chr1:78448000-78467800 Weak transcription HUVEC blood vessel
33 chr1:78448000-78468800 Weak transcription Brain Hippocampus Middle brain
34 chr1:78448600-78465400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
35 chr1:78448800-78488200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr1:78449800-78461000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
37 chr1:78450200-78461200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:78450200-78469600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr1:78450200-78469600 Weak transcription Fetal Intestine Large intestine
40 chr1:78450600-78460600 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr1:78451000-78459600 Weak transcription HUES48 Cell Line embryonic stem cell
42 chr1:78451000-78468400 Weak transcription Brain Anterior Caudate brain
43 chr1:78451800-78468400 Weak transcription HSMMtube muscle
44 chr1:78452200-78459800 Weak transcription HSMM muscle
45 chr1:78452200-78461000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:78452200-78465800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
47 chr1:78452400-78468800 Weak transcription Primary monocytes fromperipheralblood blood
48 chr1:78452400-78468800 Weak transcription Colon Smooth Muscle Colon
49 chr1:78452800-78466000 Weak transcription Muscle Satellite Cultured Cells --
50 chr1:78452800-78466000 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015