The 2.0 version of rSNPBase

Variant report

Variant rs72711180
Chromosome Location chr1:84548855-84548856
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:84544600-84551400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr1:84544600-84551400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:84544600-84556200 Weak transcription Pancreas Pancrea
4 chr1:84544600-84557200 Weak transcription Gastric stomach
5 chr1:84544800-84551600 Weak transcription Left Ventricle heart
6 chr1:84544800-84551800 Weak transcription Spleen Spleen
7 chr1:84544800-84556000 Weak transcription Primary T cells from cord blood blood
8 chr1:84544800-84556200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:84545000-84549000 Weak transcription Brain Anterior Caudate brain
10 chr1:84545000-84551400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:84545000-84551400 Weak transcription Breast Myoepithelial Primary Cells Breast
12 chr1:84545000-84551400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
13 chr1:84545000-84551400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr1:84545000-84551400 Weak transcription Fetal Stomach stomach
15 chr1:84545000-84551600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr1:84545000-84551600 Weak transcription Aorta Aorta
17 chr1:84545000-84551600 Weak transcription Fetal Muscle Leg muscle
18 chr1:84545000-84551800 Weak transcription Right Ventricle heart
19 chr1:84545000-84553400 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr1:84545000-84554200 Weak transcription HSMM muscle
21 chr1:84545000-84554400 Weak transcription A549 lung
22 chr1:84545000-84554600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:84545000-84554800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
24 chr1:84545000-84554800 Weak transcription HSMMtube muscle
25 chr1:84545000-84556200 Weak transcription Primary hematopoietic stem cells blood
26 chr1:84545000-84557200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:84545000-84558800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
28 chr1:84545000-84560600 Weak transcription Fetal Lung lung
29 chr1:84545000-84561200 Weak transcription Ovary ovary
30 chr1:84545000-84566800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
31 chr1:84545000-84570000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
32 chr1:84545200-84549000 Weak transcription Muscle Satellite Cultured Cells --
33 chr1:84545200-84549600 Weak transcription K562 blood
34 chr1:84545200-84551400 Weak transcription Fetal Intestine Large intestine
35 chr1:84545200-84551600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr1:84545200-84554600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr1:84545200-84554800 Weak transcription NHEK skin
38 chr1:84545200-84555400 Weak transcription Primary hematopoietic stem cells short term culture blood
39 chr1:84545200-84568600 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr1:84545400-84551600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:84545400-84556000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr1:84545400-84560800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:84545800-84552800 Weak transcription Brain Germinal Matrix brain
44 chr1:84545800-84553600 Weak transcription Fetal Heart heart
45 chr1:84545800-84568600 Weak transcription Stomach Smooth Muscle stomach
46 chr1:84546000-84554400 Weak transcription Hela-S3 cervix
47 chr1:84546400-84555000 Weak transcription Pancreatic Islets Pancreatic Islet
48 chr1:84546400-84560400 Weak transcription Dnd41 blood
49 chr1:84547600-84550000 Enhancers Brain Substantia Nigra brain
50 chr1:84547800-84551400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015