Variant report

Variant	rs72735726
Chromosome Location	chr4:148079765-148079766
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10002243	0.85[EUR][1000 genomes]
rs10010037	0.85[EUR][1000 genomes]
rs10010117	0.85[EUR][1000 genomes]
rs10012343	0.85[EUR][1000 genomes]
rs10034616	0.85[EUR][1000 genomes]
rs10155125	0.93[EUR][1000 genomes]
rs72733798	0.85[EUR][1000 genomes]
rs72735715	0.85[EUR][1000 genomes]
rs72735721	0.84[EUR][1000 genomes]
rs72735731	1.00[EUR][1000 genomes]
rs72735733	1.00[EUR][1000 genomes]
rs7677110	0.85[EUR][1000 genomes]
rs7697358	0.85[EUR][1000 genomes]
rs7698560	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024629	chr4:147987351-148277008	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:96 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:148078400-148080000	Enhancers	Fetal Heart	heart
2	chr4:148078800-148080000	Enhancers	Stomach Mucosa	stomach
3	chr4:148079000-148079800	Flanking Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
4	chr4:148079000-148079800	Flanking Active TSS	Fetal Muscle Trunk	muscle
5	chr4:148079000-148079800	Flanking Active TSS	Stomach Smooth Muscle	stomach
6	chr4:148079000-148080000	Bivalent/Poised TSS	iPS-15b Cell Line	embryonic stem cell
7	chr4:148079000-148080000	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr4:148079000-148080000	Flanking Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
9	chr4:148079000-148080000	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
10	chr4:148079000-148080000	Flanking Active TSS	Muscle Satellite Cultured Cells	--
11	chr4:148079000-148080000	Flanking Active TSS	Adipose Nuclei	Adipose
12	chr4:148079000-148080000	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
13	chr4:148079000-148080000	Enhancers	Fetal Brain Male	brain
14	chr4:148079000-148080000	Active TSS	A549	lung
15	chr4:148079000-148080000	Active TSS	HSMM	muscle
16	chr4:148079200-148079800	Active TSS	H1 Derived Mesenchymal Stem Cells	ES cell derived
17	chr4:148079200-148079800	Active TSS	H9 Cell Line	embryonic stem cell
18	chr4:148079200-148079800	Active TSS	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
19	chr4:148079200-148079800	Active TSS	HUES64 Cell Line	embryonic stem cell
20	chr4:148079200-148079800	Flanking Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr4:148079200-148079800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
22	chr4:148079200-148079800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
23	chr4:148079200-148079800	Bivalent Enhancer	Primary hematopoietic stem cells G-CSF-mobilized Female	--
24	chr4:148079200-148079800	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
25	chr4:148079200-148079800	Flanking Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
26	chr4:148079200-148079800	Active TSS	Brain Substantia Nigra	brain
27	chr4:148079200-148079800	Bivalent/Poised TSS	Colonic Mucosa	Colon
28	chr4:148079200-148079800	Active TSS	Duodenum Smooth Muscle	Duodenum
29	chr4:148079200-148079800	Flanking Bivalent TSS/Enh	Fetal Adrenal Gland	Adrenal Gland
30	chr4:148079200-148079800	Flanking Active TSS	Fetal Muscle Leg	muscle
31	chr4:148079200-148079800	Flanking Active TSS	Fetal Stomach	stomach
32	chr4:148079200-148079800	Flanking Active TSS	Psoas Muscle	Psoas
33	chr4:148079200-148079800	Active TSS	Rectal Smooth Muscle	rectum
34	chr4:148079200-148079800	Active TSS	Right Ventricle	heart
35	chr4:148079200-148079800	Flanking Active TSS	HSMMtube	muscle
36	chr4:148079200-148079800	Active TSS	NHLF	lung
37	chr4:148079200-148080000	Bivalent/Poised TSS	ES-I3 Cell Line	embryonic stem cell
38	chr4:148079200-148080000	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
39	chr4:148079200-148080000	Flanking Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
40	chr4:148079200-148080000	Active TSS	Brain Cingulate Gyrus	brain
41	chr4:148079200-148080000	Bivalent/Poised TSS	Fetal Intestine Large	intestine
42	chr4:148079200-148080000	Flanking Active TSS	Fetal Lung	lung
43	chr4:148079200-148080000	Active TSS	Ovary	ovary
44	chr4:148079200-148080000	Active TSS	Right Atrium	heart
45	chr4:148079200-148080000	Flanking Active TSS	HMEC	breast
46	chr4:148079200-148080000	Active TSS	NHDF-Ad	bronchial
47	chr4:148079400-148079800	Active TSS	ES-WA7 Cell Line	embryonic stem cell
48	chr4:148079400-148079800	Flanking Active TSS	H1 Cell Line	embryonic stem cell
49	chr4:148079400-148079800	Flanking Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr4:148079400-148079800	Flanking Bivalent TSS/Enh	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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