Variant report

Variant	rs72735715
Chromosome Location	chr4:148040975-148040976
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10002243	0.98[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10006983	0.85[EUR][1000 genomes]
rs10010037	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10010117	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10012343	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs10034616	1.00[EUR][1000 genomes]
rs10155125	0.93[EUR][1000 genomes]
rs17022628	0.93[EUR][1000 genomes]
rs55883521	0.93[EUR][1000 genomes]
rs72733798	1.00[EUR][1000 genomes]
rs72735721	0.84[EUR][1000 genomes]
rs72735726	0.85[EUR][1000 genomes]
rs72735731	0.85[EUR][1000 genomes]
rs72735733	0.85[EUR][1000 genomes]
rs7677110	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7697358	0.81[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs7698560	0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1024629	chr4:147987351-148277008	Weak transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Flanking Active TSS Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region miRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:148038000-148041200	Enhancers	Fetal Heart	heart
2	chr4:148038200-148041200	Enhancers	Fetal Lung	lung
3	chr4:148038400-148041400	Enhancers	Ovary	ovary
4	chr4:148039200-148041200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr4:148039800-148044000	Weak transcription	NHLF	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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