Variant report

Variant	rs72735727
Chromosome Location	chr14:70890872-70890873
allele	A/C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10132398	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10142700	0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28520402	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45447692	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs45466397	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55638149	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55787136	0.88[EUR][1000 genomes]
rs55957520	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56133620	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56263002	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7160153	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719703	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719704	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719706	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719708	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719709	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719712	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719714	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719717	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719723	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719724	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719725	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72719727	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72733802	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72735703	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72735708	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72735728	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72735746	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72735753	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72735754	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72735757	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72735760	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72735767	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72735768	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv902075	chr14:70612618-70919016	Enhancers Strong transcription Weak transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	15 gene(s)	inside rSNPs	diseases
2	esv3523741	chr14:70888699-70893997	Weak transcription Enhancers ZNF genes & repeats	TF binding region lncRNA	3 gene(s)	inside rSNPs	n/a
3	esv3523752	chr14:70890224-70892972	Weak transcription Enhancers ZNF genes & repeats	lncRNA	1 gene(s)	inside rSNPs	n/a
4	esv3523763	chr14:70890224-70892972	Weak transcription Enhancers ZNF genes & repeats	lncRNA	1 gene(s)	inside rSNPs	n/a
5	esv3364053	chr14:70890449-70892747	Weak transcription ZNF genes & repeats Enhancers	lncRNA	1 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:70890600-70892600	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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