Variant report

Variant	rs72739289
Chromosome Location	chr9:101930699-101930700
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr9:101918300..101922228-chr9:101930528..101933247,3	K562	blood:
2	chr9:101921262..101923800-chr9:101929228..101931291,2	K562	blood:

Extended variants
information (count: 3 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs10988701	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv893619	chr9:101835165-101936231	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA target site	13 gene(s)	inside rSNPs	diseases
2	nsv831666	chr9:101874985-102018690	Weak transcription Flanking Active TSS Enhancers Genic enhancers Strong transcription Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:30 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:101912600-101932200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
2	chr9:101922800-101932200	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
3	chr9:101926400-101930800	Enhancers	GM12878-XiMat	blood
4	chr9:101927800-101930800	Enhancers	Primary T killer naive cells fromperipheralblood	blood
5	chr9:101928400-101930800	Enhancers	Primary T cells from cord blood	blood
6	chr9:101928800-101930800	Weak transcription	Pancreatic Islets	Pancreatic Islet
7	chr9:101929400-101930800	Enhancers	Primary hematopoietic stem cells short term culture	blood
8	chr9:101929400-101930800	Enhancers	Thymus	Thymus
9	chr9:101929400-101931000	Enhancers	Primary B cells from peripheral blood	blood
10	chr9:101929600-101930800	Enhancers	Primary hematopoietic stem cells	blood
11	chr9:101929600-101930800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr9:101929600-101931000	Enhancers	Fetal Thymus	thymus
13	chr9:101929600-101932200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr9:101929800-101930800	Enhancers	Primary T helper naive cells from peripheral blood	blood
15	chr9:101929800-101930800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
16	chr9:101929800-101930800	Enhancers	Primary mononuclear cells fromperipheralblood	Blood
17	chr9:101929800-101933600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
18	chr9:101930000-101931800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
19	chr9:101930000-101932400	Enhancers	HUES64 Cell Line	embryonic stem cell
20	chr9:101930000-101932400	Weak transcription	K562	blood
21	chr9:101930000-101933000	Enhancers	iPS-15b Cell Line	embryonic stem cell
22	chr9:101930200-101931600	Enhancers	HUES48 Cell Line	embryonic stem cell
23	chr9:101930200-101931600	Enhancers	iPS-20b Cell Line	embryonic stem cell
24	chr9:101930400-101931400	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
25	chr9:101930400-101932400	Enhancers	HUES6 Cell Line	embryonic stem cell
26	chr9:101930400-101933200	Enhancers	H1 Cell Line	embryonic stem cell
27	chr9:101930400-101936600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
28	chr9:101930600-101931000	Enhancers	H9 Cell Line	embryonic stem cell
29	chr9:101930600-101931800	Enhancers	iPS-18 Cell Line	embryonic stem cell
30	chr9:101930600-101932400	Enhancers	ES-I3 Cell Line	embryonic stem cell

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