Variant report

Variant	rs72745322
Chromosome Location	chr15:74154505-74154506
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1349644	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72745307	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72745309	1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72745319	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72745320	1.00[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72745335	0.82[EUR][1000 genomes]
rs744616	0.88[EUR][1000 genomes];0.84[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1043335	chr15:74078689-74241186	Weak transcription Flanking Active TSS Strong transcription Enhancers Bivalent Enhancer Genic enhancers Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:74149400-74154600	Weak transcription	H1 Cell Line	embryonic stem cell
2	chr15:74149600-74158600	Weak transcription	Right Atrium	heart
3	chr15:74152000-74158400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr15:74153200-74154600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
5	chr15:74154200-74155000	Enhancers	HUES64 Cell Line	embryonic stem cell
6	chr15:74154200-74155200	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr15:74154400-74154800	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
8	chr15:74154400-74154800	Bivalent Enhancer	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr15:74154400-74155000	Enhancers	H9 Cell Line	embryonic stem cell
10	chr15:74154400-74155000	Bivalent Enhancer	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr15:74154400-74155000	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr15:74154400-74155000	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr15:74154400-74155000	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr15:74154400-74155200	Enhancers	ES-I3 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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