The 2.0 version of rSNPBase

Variant report

Variant rs727471
Chromosome Location chr2:73321893-73321894
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:73303000-73328600 Weak transcription H9 Cell Line embryonic stem cell
2 chr2:73313200-73327200 Weak transcription Primary T cells fromperipheralblood blood
3 chr2:73315600-73330400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr2:73315600-73338000 Weak transcription Primary T helper cells fromperipheralblood blood
5 chr2:73316000-73326600 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr2:73316200-73322000 Enhancers Right Ventricle heart
7 chr2:73316200-73330400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr2:73316200-73338400 Weak transcription Brain Germinal Matrix brain
9 chr2:73316400-73329000 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr2:73316400-73329200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr2:73316400-73334400 Weak transcription Fetal Brain Female brain
12 chr2:73316400-73335000 Weak transcription Brain Substantia Nigra brain
13 chr2:73316600-73322600 Enhancers Placenta Placenta
14 chr2:73316600-73323800 Weak transcription Ovary ovary
15 chr2:73316800-73322000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr2:73317600-73323800 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr2:73317600-73327000 Weak transcription Fetal Stomach stomach
18 chr2:73317600-73328600 Weak transcription Muscle Satellite Cultured Cells --
19 chr2:73318400-73328200 Weak transcription NHLF lung
20 chr2:73318400-73331800 Weak transcription Colon Smooth Muscle Colon
21 chr2:73318600-73334400 Weak transcription HMEC breast
22 chr2:73318800-73326400 Weak transcription NHEK skin
23 chr2:73319200-73322200 Enhancers Fetal Muscle Trunk muscle
24 chr2:73319200-73322200 Enhancers HUVEC blood vessel
25 chr2:73319200-73322600 Enhancers Skeletal Muscle Female skeletal muscle
26 chr2:73319200-73322800 Enhancers Skeletal Muscle Male skeletal muscle
27 chr2:73319400-73322000 Enhancers Adipose Nuclei Adipose
28 chr2:73319400-73330000 Weak transcription Brain Cingulate Gyrus brain
29 chr2:73319600-73322600 Weak transcription Brain Angular Gyrus brain
30 chr2:73319800-73324800 Weak transcription Osteobl bone
31 chr2:73320200-73324600 Weak transcription HSMM muscle
32 chr2:73320200-73328600 Weak transcription NH-A brain
33 chr2:73320200-73328800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
34 chr2:73320200-73329000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
35 chr2:73320200-73332200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr2:73320600-73322400 Enhancers Psoas Muscle Psoas
37 chr2:73320600-73323000 Weak transcription Fetal Intestine Large intestine
38 chr2:73320600-73328400 Weak transcription Fetal Intestine Small intestine
39 chr2:73320600-73329400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr2:73320600-73332800 Weak transcription Esophagus oesophagus
41 chr2:73320800-73322600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
42 chr2:73320800-73323200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
43 chr2:73320800-73327000 Enhancers Spleen Spleen
44 chr2:73320800-73328800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
45 chr2:73320800-73329600 Weak transcription Placenta Amnion Placenta Amnion
46 chr2:73320800-73332800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr2:73320800-73334400 Weak transcription Aorta Aorta
48 chr2:73321000-73324000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
49 chr2:73321000-73328800 Weak transcription Lung lung
50 chr2:73321000-73330200 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015