Variant report

Variant	rs72755767
Chromosome Location	chr5:57597216-57597217
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 31 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs1035473	0.88[ASN][1000 genomes]
rs10513135	0.88[ASN][1000 genomes]
rs11737991	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11738845	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11740290	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11744441	0.88[ASN][1000 genomes]
rs11745219	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11746013	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11747017	0.81[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11749817	0.88[ASN][1000 genomes]
rs11750320	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12515401	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17696079	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17764094	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1971059	0.94[ASN][1000 genomes]
rs1971060	0.94[ASN][1000 genomes]
rs2409007	0.94[ASN][1000 genomes]
rs4700268	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4700269	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4700273	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72755718	0.88[ASN][1000 genomes]
rs72755724	0.88[ASN][1000 genomes]
rs72755726	0.82[ASN][1000 genomes]
rs72755728	0.88[ASN][1000 genomes]
rs72755729	0.88[ASN][1000 genomes]
rs72755745	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72755750	0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7733184	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs969473	0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3489100	chr5:57545689-57669673	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	esv3489101	chr5:57545689-57669673	Enhancers Flanking Active TSS Weak transcription Active TSS ZNF genes & repeats	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57590800-57597800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
2	chr5:57596400-57597400	Enhancers	Primary monocytes fromperipheralblood	blood

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