Variant report

Variant	rs72757881
Chromosome Location	chr15:92106293-92106294
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs6496836	0.84[ASN][1000 genomes]
rs6496839	0.84[ASN][1000 genomes]
rs6496840	0.84[ASN][1000 genomes]
rs7402384	0.84[ASN][1000 genomes]
rs7495709	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv833095	chr15:92006793-92151176	Enhancers Weak transcription Bivalent Enhancer Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv1048635	chr15:92073294-92557339	Weak transcription Genic enhancers Flanking Active TSS Enhancers Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr15:92100200-92106800	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
2	chr15:92102000-92106800	Enhancers	Brain Anterior Caudate	brain
3	chr15:92104400-92106400	Enhancers	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr15:92104400-92106600	Enhancers	Adipose Nuclei	Adipose
5	chr15:92104400-92106800	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
6	chr15:92105600-92106400	Enhancers	Breast Myoepithelial Primary Cells	Breast
7	chr15:92105600-92106800	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
8	chr15:92105600-92106800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr15:92105800-92106400	Enhancers	iPS-18 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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