Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10042933	0.88[EUR][1000 genomes]
rs1035484	0.80[EUR][1000 genomes]
rs11948948	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs16888201	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs17712159	0.91[EUR][1000 genomes]
rs1848514	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs33921924	0.80[EUR][1000 genomes]
rs34150563	0.80[EUR][1000 genomes]
rs34974449	0.80[EUR][1000 genomes]
rs4700289	0.80[EUR][1000 genomes]
rs4700300	0.81[AMR][1000 genomes]
rs55665530	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs56010771	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs56286824	0.80[EUR][1000 genomes]
rs6450474	0.80[EUR][1000 genomes]
rs72758173	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72758189	0.82[AFR][1000 genomes];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758193	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72758200	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72760204	0.93[AFR][1000 genomes];0.90[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72760224	0.85[AMR][1000 genomes]
rs7706545	0.80[EUR][1000 genomes]
rs7725097	0.82[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs7736949	0.80[EUR][1000 genomes]
rs929818	0.88[AMR][1000 genomes];0.99[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv598246	chr5:57777623-57785273	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer ZNF genes & repeats	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:57773200-57785400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
2	chr5:57778200-57782800	Enhancers	Primary B cells from peripheral blood	blood
3	chr5:57779000-57782400	Enhancers	Monocytes-CD14+_RO01746	blood
4	chr5:57779400-57783600	Enhancers	Primary monocytes fromperipheralblood	blood
5	chr5:57780400-57783000	Enhancers	Primary neutrophils fromperipheralblood	blood
6	chr5:57781000-57782800	Enhancers	Primary B cells from cord blood	blood
7	chr5:57781200-57785000	Weak transcription	Primary hematopoietic stem cells short term culture	blood

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