Variant report

Variant	rs72773601
Chromosome Location	chr5:94074417-94074418
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10043446	0.81[ASN][1000 genomes]
rs11135412	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs17084010	0.94[ASN][1000 genomes]
rs72773594	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72773595	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72773598	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72773602	0.95[ASN][1000 genomes]
rs7700629	0.96[ASN][1000 genomes]
rs9314118	0.84[ASN][1000 genomes]

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:94048600-94081400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr5:94049400-94081400	Weak transcription	HUVEC	blood vessel
3	chr5:94049800-94077600	Weak transcription	Primary hematopoietic stem cells	blood
4	chr5:94052400-94079600	Weak transcription	Primary neutrophils fromperipheralblood	blood
5	chr5:94067000-94080600	Weak transcription	Primary monocytes fromperipheralblood	blood
6	chr5:94071000-94080000	Weak transcription	Monocytes-CD14+_RO01746	blood
7	chr5:94072600-94086200	Weak transcription	Spleen	Spleen
8	chr5:94073600-94074800	Enhancers	Fetal Thymus	thymus
9	chr5:94074200-94077200	Weak transcription	Hela-S3	cervix
10	chr5:94074200-94127600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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