The 2.0 version of rSNPBase

Variant report

Variant rs72779347
Chromosome Location chr2:20087989-20087990
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:20068800-20097200 Weak transcription Aorta Aorta
2 chr2:20069000-20098200 Weak transcription Right Atrium heart
3 chr2:20069800-20097200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr2:20075400-20097600 Weak transcription Fetal Kidney kidney
5 chr2:20076400-20093600 Weak transcription Primary T helper cells PMA-I stimulated --
6 chr2:20076400-20097200 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr2:20076600-20097400 Weak transcription Primary hematopoietic stem cells blood
8 chr2:20076600-20098200 Weak transcription Fetal Muscle Leg muscle
9 chr2:20076800-20091000 Weak transcription Primary B cells from cord blood blood
10 chr2:20076800-20095400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr2:20076800-20095800 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr2:20076800-20097200 Weak transcription Fetal Thymus thymus
13 chr2:20076800-20098400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr2:20076800-20099800 Weak transcription Fetal Intestine Large intestine
15 chr2:20079200-20098600 Weak transcription Fetal Intestine Small intestine
16 chr2:20079400-20097200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
17 chr2:20079800-20099000 Weak transcription Thymus Thymus
18 chr2:20081800-20095200 Weak transcription Primary T cells from cord blood blood
19 chr2:20083000-20095400 Weak transcription Fetal Brain Female brain
20 chr2:20085600-20088600 Weak transcription Right Ventricle heart
21 chr2:20085800-20090000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
22 chr2:20086400-20097400 Weak transcription Stomach Smooth Muscle stomach
23 chr2:20086600-20088600 Weak transcription Skeletal Muscle Male skeletal muscle
24 chr2:20086600-20089200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr2:20086600-20089200 Weak transcription NHEK skin
26 chr2:20086600-20091200 Weak transcription Psoas Muscle Psoas
27 chr2:20086600-20091800 Weak transcription Spleen Spleen
28 chr2:20086600-20095400 Weak transcription Breast Myoepithelial Primary Cells Breast
29 chr2:20086600-20097400 Weak transcription HMEC breast
30 chr2:20086600-20099800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr2:20086800-20089000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr2:20087000-20088000 Enhancers Rectal Mucosa Donor 31 rectum
33 chr2:20087000-20088400 Enhancers Primary monocytes fromperipheralblood blood
34 chr2:20087000-20088400 Enhancers Monocytes-CD14+_RO01746 blood
35 chr2:20087000-20088600 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr2:20087200-20089200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr2:20087200-20097400 Weak transcription Fetal Adrenal Gland Adrenal Gland
38 chr2:20087400-20097800 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr2:20087600-20088600 Weak transcription Brain Substantia Nigra brain
40 chr2:20087800-20088000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
41 chr2:20087800-20088000 Enhancers Primary hematopoietic stem cells short term culture blood
42 chr2:20087800-20088400 Enhancers Gastric stomach
43 chr2:20087800-20090600 Enhancers Left Ventricle heart

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Last update: Aug 31, 2015