Variant report

Variant	rs72785446
Chromosome Location	chr5:95386554-95386555
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs72785442	1.00[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:9 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2758003	chr5:95231706-95540433	Flanking Active TSS Weak transcription Enhancers Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	20 gene(s)	inside rSNPs	diseases
2	esv2759355	chr5:95231706-95540433	Weak transcription Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	20 gene(s)	inside rSNPs	diseases
3	nsv823146	chr5:95300912-95453557	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA	9 gene(s)	inside rSNPs	diseases
4	esv2757121	chr5:95304236-95539536	Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Strong transcription Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
5	esv34203	chr5:95310985-95452324	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS Active TSS Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA	8 gene(s)	inside rSNPs	diseases
6	nsv522097	chr5:95347786-95425199	Flanking Active TSS Weak transcription Enhancers ZNF genes & repeats Bivalent Enhancer Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
7	nsv522465	chr5:95347786-95425199	Enhancers Weak transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA	6 gene(s)	inside rSNPs	diseases
8	nsv1030444	chr5:95353620-95995619	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases
9	nsv537810	chr5:95353620-95995619	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:34 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:95383400-95387400	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr5:95384400-95386600	Enhancers	HUES6 Cell Line	embryonic stem cell
3	chr5:95384400-95386600	Enhancers	NHDF-Ad	bronchial
4	chr5:95384600-95386600	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr5:95384600-95386600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
6	chr5:95384600-95386600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr5:95384600-95386600	Enhancers	Right Atrium	heart
8	chr5:95384600-95387000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr5:95384600-95387000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
10	chr5:95384600-95387400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr5:95384600-95387400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr5:95384600-95387400	Enhancers	Pancreas	Pancrea
13	chr5:95384600-95390600	Enhancers	Liver	Liver
14	chr5:95384800-95386600	Enhancers	Osteobl	bone
15	chr5:95385000-95387400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr5:95385000-95387400	Enhancers	Dnd41	blood
17	chr5:95385000-95387600	Enhancers	HMEC	breast
18	chr5:95385200-95387400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
19	chr5:95385200-95387400	Enhancers	NHEK	skin
20	chr5:95385800-95386600	Flanking Active TSS	Muscle Satellite Cultured Cells	--
21	chr5:95385800-95386600	Enhancers	Gastric	stomach
22	chr5:95385800-95386800	Flanking Active TSS	HSMM	muscle
23	chr5:95386000-95386600	Enhancers	Lung	lung
24	chr5:95386000-95389600	Weak transcription	Monocytes-CD14+_RO01746	blood
25	chr5:95386200-95386600	Enhancers	HSMMtube	muscle
26	chr5:95386200-95387200	Weak transcription	Left Ventricle	heart
27	chr5:95386200-95389600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
28	chr5:95386400-95386600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
29	chr5:95386400-95386600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
30	chr5:95386400-95386600	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
31	chr5:95386400-95387200	Weak transcription	HUVEC	blood vessel
32	chr5:95386400-95389600	Weak transcription	Primary monocytes fromperipheralblood	blood
33	chr5:95386400-95389600	Weak transcription	Aorta	Aorta
34	chr5:95386400-95393800	Weak transcription	ES-I3 Cell Line	embryonic stem cell

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