The 2.0 version of rSNPBase

Variant report

Variant rs72787718
Chromosome Location chr2:30474351-30474352
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30457000-30476600 Weak transcription iPS-15b Cell Line embryonic stem cell
2 chr2:30457800-30481000 Weak transcription Gastric stomach
3 chr2:30458400-30475800 Weak transcription Fetal Kidney kidney
4 chr2:30461000-30479800 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr2:30462800-30474800 Weak transcription Muscle Satellite Cultured Cells --
6 chr2:30462800-30475400 Genic enhancers Primary T regulatory cells fromperipheralblood blood
7 chr2:30463000-30474800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr2:30463000-30475400 Genic enhancers Primary T cells fromperipheralblood blood
9 chr2:30463400-30474800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
10 chr2:30463400-30474800 Weak transcription Duodenum Mucosa Duodenum
11 chr2:30463400-30475000 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr2:30463400-30475400 Weak transcription Fetal Muscle Trunk muscle
13 chr2:30463400-30475600 Weak transcription Brain Germinal Matrix brain
14 chr2:30463400-30475600 Weak transcription Colon Smooth Muscle Colon
15 chr2:30463400-30475600 Weak transcription Esophagus oesophagus
16 chr2:30463600-30475600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr2:30463600-30475600 Weak transcription Osteobl bone
18 chr2:30463800-30474800 Weak transcription Duodenum Smooth Muscle Duodenum
19 chr2:30464200-30474600 Weak transcription Small Intestine intestine
20 chr2:30465400-30480000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr2:30466000-30477000 Genic enhancers Primary B cells from peripheral blood blood
22 chr2:30466200-30476400 Genic enhancers Primary T helper cells PMA-I stimulated --
23 chr2:30466200-30480400 Weak transcription Fetal Brain Male brain
24 chr2:30466600-30474600 Weak transcription NH-A brain
25 chr2:30467200-30475600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr2:30467400-30475600 Enhancers Primary T killer memory cells from peripheral blood blood
27 chr2:30467600-30479600 Weak transcription Fetal Brain Female brain
28 chr2:30468000-30475400 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
29 chr2:30468600-30475600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
30 chr2:30469800-30475000 Genic enhancers Breast Myoepithelial Primary Cells Breast
31 chr2:30470200-30474400 Genic enhancers NHLF lung
32 chr2:30470400-30474800 Enhancers K562 blood
33 chr2:30470400-30478000 Enhancers Left Ventricle heart
34 chr2:30470400-30479600 Genic enhancers Fetal Thymus thymus
35 chr2:30470600-30475000 Genic enhancers A549 lung
36 chr2:30470800-30475200 Genic enhancers Thymus Thymus
37 chr2:30471000-30484400 Weak transcription Pancreatic Islets Pancreatic Islet
38 chr2:30471200-30479600 Enhancers Primary T killer naive cells fromperipheralblood blood
39 chr2:30471200-30482000 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
40 chr2:30471400-30479400 Enhancers Placenta Placenta
41 chr2:30471600-30474800 Weak transcription Sigmoid Colon Sigmoid Colon
42 chr2:30471800-30481600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
43 chr2:30472000-30475000 Genic enhancers Primary T helper cells fromperipheralblood blood
44 chr2:30472200-30474400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr2:30472200-30474400 Enhancers Skeletal Muscle Male skeletal muscle
46 chr2:30472200-30475000 Genic enhancers Spleen Spleen
47 chr2:30472200-30475600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr2:30472200-30476200 Enhancers Lung lung
49 chr2:30472200-30478800 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
50 chr2:30472200-30480400 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015