Variant report

Variant	rs72811041
Chromosome Location	chr10:98012127-98012128
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:98010068..98012555-chr10:98015441..98017088,2	MCF-7	breast:
2	chr10:98011501..98013268-chr10:98017760..98019968,2	MCF-7	breast:

rs_ID	r²[population]
rs11593308	1.00[ASN][1000 genomes]
rs12570043	0.82[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12779295	1.00[ASN][1000 genomes]
rs72811038	0.84[AMR][1000 genomes];0.89[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs72811055	1.00[ASN][1000 genomes]
rs72829510	1.00[ASN][1000 genomes]
rs72829522	1.00[ASN][1000 genomes]

Chromatin state (count:26 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:97996400-98029200	Weak transcription	Fetal Stomach	stomach
2	chr10:98002000-98015400	Weak transcription	Esophagus	oesophagus
3	chr10:98005000-98019000	Weak transcription	Colonic Mucosa	Colon
4	chr10:98007200-98018800	Weak transcription	Sigmoid Colon	Sigmoid Colon
5	chr10:98009000-98012400	Enhancers	Primary B cells from peripheral blood	blood
6	chr10:98009200-98012600	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
7	chr10:98009400-98012600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
8	chr10:98009400-98014800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr10:98009400-98014800	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr10:98009400-98016800	Weak transcription	Pancreas	Pancrea
11	chr10:98009600-98015000	Weak transcription	iPS-18 Cell Line	embryonic stem cell
12	chr10:98009600-98015200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
13	chr10:98010000-98017200	Weak transcription	Small Intestine	intestine
14	chr10:98010000-98018000	Weak transcription	Gastric	stomach
15	chr10:98010400-98014800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
16	chr10:98010400-98017000	Weak transcription	Stomach Mucosa	stomach
17	chr10:98010600-98025400	Weak transcription	Fetal Kidney	kidney
18	chr10:98011200-98015400	Weak transcription	Fetal Intestine Large	intestine
19	chr10:98011200-98015400	Weak transcription	Fetal Intestine Small	intestine
20	chr10:98011200-98016800	Weak transcription	Spleen	Spleen
21	chr10:98011200-98018800	Weak transcription	Duodenum Mucosa	Duodenum
22	chr10:98011200-98019000	Weak transcription	Rectal Mucosa Donor 31	rectum
23	chr10:98011400-98012400	Weak transcription	Liver	Liver
24	chr10:98011400-98017800	Weak transcription	Rectal Mucosa Donor 29	rectum
25	chr10:98011800-98012600	Enhancers	Primary B cells from cord blood	blood
26	chr10:98012000-98012400	Strong transcription	GM12878-XiMat	blood

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