Variant report

Variant	rs72815871
Chromosome Location	chr16:80085242-80085243
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs10514475	1.00[ASN][1000 genomes]
rs11640834	1.00[ASN][1000 genomes]
rs11643333	1.00[ASN][1000 genomes]
rs11647154	1.00[ASN][1000 genomes]
rs11862421	1.00[ASN][1000 genomes]
rs12926656	1.00[ASN][1000 genomes]
rs1842022	1.00[ASN][1000 genomes]
rs34040363	1.00[ASN][1000 genomes]
rs3823	1.00[ASN][1000 genomes]
rs7200669	1.00[ASN][1000 genomes]
rs8043982	1.00[ASN][1000 genomes]
rs8049125	1.00[ASN][1000 genomes]
rs9941052	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv573285	chr16:79158182-80127326	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	28 gene(s)	inside rSNPs	diseases
2	nsv573294	chr16:80005642-80131944	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:80081000-80092200	Weak transcription	Right Atrium	heart
2	chr16:80085200-80085600	Enhancers	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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