Variant report

Variant	rs72818084
Chromosome Location	chr10:90064700-90064701
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs4934396	0.84[EUR][1000 genomes]
rs72818100	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72818102	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72820004	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72820008	0.84[EUR][1000 genomes]
rs72820013	0.83[EUR][1000 genomes]
rs72820014	0.83[EUR][1000 genomes]
rs72820018	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895879	chr10:90015725-90219298	Enhancers Weak transcription Active TSS Flanking Active TSS ZNF genes & repeats Genic enhancers Bivalent Enhancer	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv551838	chr10:90058637-90137045	Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:90042800-90071600	Weak transcription	Psoas Muscle	Psoas
2	chr10:90057000-90075200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr10:90060200-90070800	Weak transcription	Primary B cells from peripheral blood	blood
4	chr10:90063800-90071400	Weak transcription	Lung	lung

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links