The 2.0 version of rSNPBase

Variant report

Variant rs72823505
Chromosome Location chr17:46030994-46030995
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr17:46019800-46034200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr17:46019800-46047600 Weak transcription Aorta Aorta
3 chr17:46020000-46034600 Weak transcription H9 Cell Line embryonic stem cell
4 chr17:46024400-46031600 Enhancers Breast Myoepithelial Primary Cells Breast
5 chr17:46027200-46031200 Weak transcription Pancreatic Islets Pancreatic Islet
6 chr17:46027200-46032600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr17:46027200-46034400 Weak transcription Hela-S3 cervix
8 chr17:46027200-46047200 Weak transcription Spleen Spleen
9 chr17:46027400-46032600 Weak transcription NHLF lung
10 chr17:46027400-46033800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr17:46027400-46033800 Weak transcription NHDF-Ad bronchial
12 chr17:46027400-46034000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr17:46027400-46034200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
14 chr17:46027400-46034400 Weak transcription Fetal Lung lung
15 chr17:46027400-46034600 Weak transcription K562 blood
16 chr17:46027400-46034800 Weak transcription NH-A brain
17 chr17:46027600-46031600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
18 chr17:46027600-46032200 Weak transcription Primary T regulatory cells fromperipheralblood blood
19 chr17:46027600-46032600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
20 chr17:46027600-46033000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
21 chr17:46027600-46033800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr17:46027600-46034200 Weak transcription H1 Cell Line embryonic stem cell
23 chr17:46027600-46034400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr17:46027600-46034800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
25 chr17:46027600-46047400 Weak transcription Right Ventricle heart
26 chr17:46027600-46047600 Weak transcription Skeletal Muscle Female skeletal muscle
27 chr17:46027800-46031600 Weak transcription Small Intestine intestine
28 chr17:46027800-46032200 Weak transcription Primary B cells from cord blood blood
29 chr17:46027800-46032600 Weak transcription A549 lung
30 chr17:46027800-46032800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr17:46027800-46033600 Weak transcription Brain Angular Gyrus brain
32 chr17:46027800-46034000 Weak transcription Fetal Muscle Trunk muscle
33 chr17:46027800-46034200 Weak transcription Primary B cells from peripheral blood blood
34 chr17:46028000-46031200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr17:46028000-46031200 Weak transcription Esophagus oesophagus
36 chr17:46028000-46032800 Weak transcription Placenta Amnion Placenta Amnion
37 chr17:46028000-46033000 Weak transcription Primary T helper naive cells from peripheral blood blood
38 chr17:46028000-46047400 Weak transcription Primary T helper naive cells fromperipheralblood blood
39 chr17:46028000-46047600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr17:46028200-46031000 Weak transcription Primary T helper cells fromperipheralblood blood
41 chr17:46028200-46031400 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr17:46028200-46032800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr17:46028200-46032800 Weak transcription HMEC breast
44 chr17:46029000-46032200 Transcr. at gene 5' and 3' Rectal Mucosa Donor 29 rectum
45 chr17:46029200-46031400 Strong transcription NHEK skin
46 chr17:46029200-46035200 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
47 chr17:46029400-46031200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr17:46029400-46032600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
49 chr17:46029600-46031400 Strong transcription Primary T cells from cord blood blood
50 chr17:46029600-46031400 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015