Variant report

Variant	rs72830884
Chromosome Location	chr6:24306802-24306803
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs33914824	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72830861	0.86[EUR][1000 genomes]
rs72833009	0.97[EUR][1000 genomes]
rs72833012	0.97[EUR][1000 genomes]
rs9467100	0.84[AFR][1000 genomes]
rs9467105	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs9467106	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:24294600-24312000	Weak transcription	Fetal Intestine Small	intestine
2	chr6:24297800-24308000	Weak transcription	Fetal Kidney	kidney
3	chr6:24298000-24308200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
4	chr6:24302400-24307800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr6:24302600-24307800	Weak transcription	HUES64 Cell Line	embryonic stem cell
6	chr6:24302600-24308000	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr6:24303000-24310000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr6:24303200-24308000	Weak transcription	HUES48 Cell Line	embryonic stem cell
9	chr6:24304000-24308000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr6:24306200-24307000	Enhancers	Liver	Liver
11	chr6:24306200-24308600	Enhancers	A549	lung
12	chr6:24306400-24308200	Enhancers	HepG2	liver
13	chr6:24306600-24308000	Weak transcription	HSMMtube	muscle

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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