The 2.0 version of rSNPBase

Variant report

Variant rs72855735
Chromosome Location chr1:9871015-9871016
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:100 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:9854000-9871600 Weak transcription Brain Germinal Matrix brain
2 chr1:9859000-9871400 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr1:9859000-9875000 Weak transcription Monocytes-CD14+_RO01746 blood
4 chr1:9859000-9881800 Weak transcription Brain Cingulate Gyrus brain
5 chr1:9859000-9882400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr1:9859200-9871400 Weak transcription A549 lung
7 chr1:9859200-9871800 Weak transcription Rectal Smooth Muscle rectum
8 chr1:9859200-9874200 Weak transcription Stomach Smooth Muscle stomach
9 chr1:9859200-9874800 Weak transcription Primary monocytes fromperipheralblood blood
10 chr1:9859400-9881600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr1:9860400-9878600 Weak transcription Primary B cells from cord blood blood
12 chr1:9863400-9873200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr1:9865000-9874600 Weak transcription Fetal Intestine Large intestine
14 chr1:9865000-9874800 Weak transcription Placenta Placenta
15 chr1:9865000-9882200 Weak transcription Fetal Muscle Leg muscle
16 chr1:9865400-9881600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr1:9865600-9871200 Weak transcription Primary T killer memory cells from peripheral blood blood
18 chr1:9865600-9871400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
19 chr1:9865600-9871400 Weak transcription Stomach Mucosa stomach
20 chr1:9865600-9873000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:9865600-9873600 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr1:9865600-9877000 Weak transcription iPS-18 Cell Line embryonic stem cell
23 chr1:9865600-9879000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr1:9865600-9880800 Weak transcription Hela-S3 cervix
25 chr1:9865600-9882200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
26 chr1:9866400-9880600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
27 chr1:9866600-9871200 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr1:9866600-9871400 Weak transcription HepG2 liver
29 chr1:9868200-9874800 Weak transcription Primary hematopoietic stem cells blood
30 chr1:9868200-9874800 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr1:9868200-9875000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
32 chr1:9868200-9882600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:9868400-9880800 Weak transcription iPS-15b Cell Line embryonic stem cell
34 chr1:9868400-9880800 Weak transcription Primary T cells from cord blood blood
35 chr1:9868400-9882600 Weak transcription H9 Cell Line embryonic stem cell
36 chr1:9869000-9872200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
37 chr1:9869200-9871400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr1:9869200-9871400 Weak transcription Primary T regulatory cells fromperipheralblood blood
39 chr1:9869200-9872400 Enhancers NHEK skin
40 chr1:9869200-9874800 Weak transcription Colonic Mucosa Colon
41 chr1:9869200-9880800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
42 chr1:9869200-9882600 Weak transcription Esophagus oesophagus
43 chr1:9869400-9871200 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr1:9869400-9871200 Weak transcription Brain Substantia Nigra brain
45 chr1:9869400-9871400 Weak transcription Brain Anterior Caudate brain
46 chr1:9869400-9872200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:9869400-9874600 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr1:9869400-9882600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr1:9869600-9871200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
50 chr1:9869600-9871200 Weak transcription Brain Angular Gyrus brain

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Last update: Aug 31, 2015