The 2.0 version of rSNPBase

Variant report

Variant rs946279
Chromosome Location chr1:9875341-9875342
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:9859000-9881800 Weak transcription Brain Cingulate Gyrus brain
2 chr1:9859000-9882400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
3 chr1:9859400-9881600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
4 chr1:9860400-9878600 Weak transcription Primary B cells from cord blood blood
5 chr1:9865000-9882200 Weak transcription Fetal Muscle Leg muscle
6 chr1:9865400-9881600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr1:9865600-9877000 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr1:9865600-9879000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr1:9865600-9880800 Weak transcription Hela-S3 cervix
10 chr1:9865600-9882200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:9866400-9880600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:9868200-9882600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:9868400-9880800 Weak transcription iPS-15b Cell Line embryonic stem cell
14 chr1:9868400-9880800 Weak transcription Primary T cells from cord blood blood
15 chr1:9868400-9882600 Weak transcription H9 Cell Line embryonic stem cell
16 chr1:9869200-9880800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr1:9869200-9882600 Weak transcription Esophagus oesophagus
18 chr1:9869400-9882600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr1:9869600-9877000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:9869600-9877000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr1:9869600-9877000 Weak transcription HUES6 Cell Line embryonic stem cell
22 chr1:9869600-9880200 Weak transcription Dnd41 blood
23 chr1:9869600-9881600 Weak transcription Fetal Stomach stomach
24 chr1:9869600-9882000 Weak transcription NHLF lung
25 chr1:9869600-9882400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr1:9869800-9875600 Weak transcription Spleen Spleen
27 chr1:9869800-9877000 Weak transcription ES-I3 Cell Line embryonic stem cell
28 chr1:9869800-9877000 Weak transcription Ovary ovary
29 chr1:9869800-9879600 Weak transcription GM12878-XiMat blood
30 chr1:9869800-9882200 Weak transcription Fetal Thymus thymus
31 chr1:9869800-9882400 Weak transcription Thymus Thymus
32 chr1:9869800-9882600 Weak transcription Right Atrium heart
33 chr1:9869800-9882800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
34 chr1:9870000-9881600 Weak transcription Colon Smooth Muscle Colon
35 chr1:9870000-9882400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
36 chr1:9870200-9880800 Weak transcription HMEC breast
37 chr1:9870400-9880200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
38 chr1:9870600-9875600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr1:9870600-9880200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr1:9871400-9880400 Weak transcription Primary T helper naive cells from peripheral blood blood
41 chr1:9871600-9876200 Weak transcription Primary T killer naive cells fromperipheralblood blood
42 chr1:9871600-9881600 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr1:9871800-9880600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
44 chr1:9871800-9881800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
45 chr1:9871800-9881800 Weak transcription Duodenum Smooth Muscle Duodenum
46 chr1:9871800-9881800 Weak transcription Skeletal Muscle Male skeletal muscle
47 chr1:9872400-9875400 Weak transcription Brain Angular Gyrus brain
48 chr1:9872400-9880200 Weak transcription Brain Inferior Temporal Lobe brain
49 chr1:9872400-9880600 Weak transcription Fetal Brain Male brain
50 chr1:9872400-9881800 Weak transcription Skeletal Muscle Female skeletal muscle

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Last update: Aug 31, 2015