The 2.0 version of rSNPBase

Variant report

Variant rs72861660
Chromosome Location chr4:78093978-78093979
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr4:78080200-78094400 Weak transcription Psoas Muscle Psoas
2 chr4:78083400-78095600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr4:78083400-78095600 Weak transcription HepG2 liver
4 chr4:78084600-78097800 Weak transcription Esophagus oesophagus
5 chr4:78084600-78102200 Weak transcription Spleen Spleen
6 chr4:78085800-78096600 Weak transcription Brain Angular Gyrus brain
7 chr4:78086200-78095600 Weak transcription Ovary ovary
8 chr4:78086400-78094200 Weak transcription Brain Hippocampus Middle brain
9 chr4:78087200-78094400 Strong transcription Primary B cells from cord blood blood
10 chr4:78087400-78100600 Weak transcription Hela-S3 cervix
11 chr4:78087600-78095000 Weak transcription HUVEC blood vessel
12 chr4:78088800-78094000 Weak transcription Brain Inferior Temporal Lobe brain
13 chr4:78088800-78096800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
14 chr4:78089400-78108000 Weak transcription Left Ventricle heart
15 chr4:78090400-78109800 Weak transcription Gastric stomach
16 chr4:78090600-78094200 Weak transcription H1 Cell Line embryonic stem cell
17 chr4:78090800-78098000 Weak transcription Fetal Brain Male brain
18 chr4:78091000-78094000 Weak transcription Sigmoid Colon Sigmoid Colon
19 chr4:78091000-78094200 Weak transcription H9 Cell Line embryonic stem cell
20 chr4:78091000-78097600 Weak transcription Placenta Amnion Placenta Amnion
21 chr4:78091400-78094000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr4:78091600-78098000 Weak transcription Cortex derived primary cultured neurospheres brain
23 chr4:78091800-78094600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr4:78091800-78095000 Weak transcription GM12878-XiMat blood
25 chr4:78091800-78105000 Weak transcription Adipose Nuclei Adipose
26 chr4:78092000-78094600 Enhancers HSMMtube muscle
27 chr4:78092000-78095400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr4:78092000-78097800 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr4:78092000-78099000 Enhancers HMEC breast
30 chr4:78092200-78095600 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr4:78092200-78096400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr4:78092200-78096400 Weak transcription Aorta Aorta
33 chr4:78092200-78097600 Weak transcription Fetal Intestine Large intestine
34 chr4:78092200-78097600 Weak transcription Fetal Intestine Small intestine
35 chr4:78092200-78097800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
36 chr4:78092200-78099200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr4:78092200-78106000 Weak transcription Primary T cells from cord blood blood
38 chr4:78092400-78094000 Weak transcription Stomach Smooth Muscle stomach
39 chr4:78092400-78094200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr4:78092400-78094400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
41 chr4:78092400-78094400 Weak transcription Rectal Mucosa Donor 29 rectum
42 chr4:78092400-78094600 Weak transcription Fetal Muscle Leg muscle
43 chr4:78092400-78094600 Weak transcription Lung lung
44 chr4:78092400-78094800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr4:78092400-78096200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr4:78092400-78096200 Weak transcription Brain Germinal Matrix brain
47 chr4:78092400-78096200 Weak transcription Fetal Brain Female brain
48 chr4:78092400-78096400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
49 chr4:78092400-78097600 Weak transcription Fetal Stomach stomach
50 chr4:78092400-78097800 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015