Variant report

Variant	rs7286320
Chromosome Location	chr22:31763724-31763725
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11913573	1.00[ASN][1000 genomes]
rs11913621	1.00[ASN][1000 genomes]
rs12106594	1.00[ASN][1000 genomes]
rs35351984	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35923988	1.00[ASN][1000 genomes]
rs41279977	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs5997930	0.85[CEU][hapmap];1.00[GIH][hapmap];0.88[TSI][hapmap];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs5998031	1.00[ASN][1000 genomes]
rs7287648	1.00[ASN][1000 genomes]
rs7290752	0.86[EUR][1000 genomes]
rs7291131	0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7292627	1.00[ASN][1000 genomes]
rs740229	1.00[ASN][1000 genomes]
rs757871	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834176	chr22:31682426-31864701	Weak transcription Enhancers Genic enhancers Active TSS Strong transcription Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	52 gene(s)	inside rSNPs	diseases
2	esv1816779	chr22:31743711-31797094	Enhancers Flanking Active TSS Active TSS Weak transcription Bivalent/Poised TSS Genic enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region	13 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:31756400-31763800	Weak transcription	HUES6 Cell Line	embryonic stem cell
2	chr22:31763400-31763800	Enhancers	Primary hematopoietic stem cells short term culture	blood
3	chr22:31763400-31764000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr22:31763600-31764000	Enhancers	ES-I3 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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