The 2.0 version of rSNPBase

Variant report

Variant rs72865029
Chromosome Location chr3:43544147-43544148
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:43504800-43553400 Weak transcription Duodenum Mucosa Duodenum
2 chr3:43526000-43560800 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr3:43527200-43560200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
4 chr3:43533000-43553000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr3:43533200-43544800 Weak transcription K562 blood
6 chr3:43538400-43545200 Enhancers Primary T helper cells PMA-I stimulated --
7 chr3:43539000-43545400 Enhancers HUVEC blood vessel
8 chr3:43539200-43575000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
9 chr3:43539600-43558800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr3:43539800-43544400 Enhancers Primary T cells fromperipheralblood blood
11 chr3:43539800-43544800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr3:43539800-43544800 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr3:43539800-43545200 Enhancers Primary T cells from cord blood blood
14 chr3:43539800-43546400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
15 chr3:43539800-43553800 Weak transcription HSMMtube muscle
16 chr3:43540000-43544800 Enhancers Primary T helper cells fromperipheralblood blood
17 chr3:43540000-43546200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
18 chr3:43540000-43546600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr3:43540000-43548800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr3:43540000-43554200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
21 chr3:43540000-43554400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr3:43540000-43556600 Weak transcription Fetal Intestine Small intestine
23 chr3:43540000-43582000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
24 chr3:43540200-43544600 Enhancers Primary T helper naive cells fromperipheralblood blood
25 chr3:43540200-43545000 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr3:43540200-43550800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr3:43540200-43554000 Weak transcription Muscle Satellite Cultured Cells --
28 chr3:43540200-43559000 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr3:43540200-43564600 Weak transcription NHEK skin
30 chr3:43540200-43602200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
31 chr3:43540400-43545000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
32 chr3:43540400-43545000 Enhancers Primary T killer naive cells fromperipheralblood blood
33 chr3:43540400-43547200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr3:43540600-43544800 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr3:43540600-43560800 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr3:43540800-43554200 Weak transcription Rectal Mucosa Donor 29 rectum
37 chr3:43540800-43559200 Weak transcription Fetal Muscle Leg muscle
38 chr3:43541200-43548600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
39 chr3:43541600-43544200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
40 chr3:43541600-43559000 Weak transcription Adipose Nuclei Adipose
41 chr3:43541800-43558600 Weak transcription Aorta Aorta
42 chr3:43542000-43544800 Weak transcription Fetal Adrenal Gland Adrenal Gland
43 chr3:43542000-43559000 Weak transcription Monocytes-CD14+_RO01746 blood
44 chr3:43542800-43544200 Enhancers Primary Natural Killer cells fromperipheralblood blood
45 chr3:43542800-43545000 Enhancers Primary T helper naive cells from peripheral blood blood
46 chr3:43542800-43588800 Weak transcription Left Ventricle heart
47 chr3:43543000-43544600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr3:43543200-43545200 Enhancers Primary T helper 17 cells PMA-I stimulated --
49 chr3:43543800-43544200 Enhancers Primary hematopoietic stem cells short term culture blood
50 chr3:43543800-43544200 Enhancers Lung lung

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Last update: Aug 31, 2015