Variant report

Variant	rs72874983
Chromosome Location	chr11:26305647-26305648
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10834945	0.80[EUR][1000 genomes]
rs17308985	0.83[AMR][1000 genomes]
rs17308992	0.84[EUR][1000 genomes]
rs2100820	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs55642080	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs56131609	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs56347193	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs56357229	0.93[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs72874910	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs72874951	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs72874968	0.97[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72874981	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs72874987	0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs72876907	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs72876910	0.83[AMR][1000 genomes];0.84[EUR][1000 genomes]

No data

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:26286000-26306200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:26305400-26306000	Enhancers	H1 Cell Line	embryonic stem cell
3	chr11:26305400-26306200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
4	chr11:26305600-26305800	Enhancers	H9 Cell Line	embryonic stem cell
5	chr11:26305600-26305800	Enhancers	HUES48 Cell Line	embryonic stem cell
6	chr11:26305600-26305800	Enhancers	iPS-15b Cell Line	embryonic stem cell
7	chr11:26305600-26305800	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr11:26305600-26305800	ZNF genes & repeats	iPS DF 6.9 Cell Line	embryonic stem cell
9	chr11:26305600-26305800	Bivalent/Poised TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
10	chr11:26305600-26305800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
11	chr11:26305600-26305800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
12	chr11:26305600-26305800	Enhancers	HUVEC	blood vessel
13	chr11:26305600-26305800	Enhancers	NHDF-Ad	bronchial
14	chr11:26305600-26306000	Flanking Active TSS	ES-I3 Cell Line	embryonic stem cell
15	chr11:26305600-26306000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
16	chr11:26305600-26306000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr11:26305600-26306000	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr11:26305600-26306000	Enhancers	Ovary	ovary
19	chr11:26305600-26306000	Flanking Active TSS	Osteobl	bone
20	chr11:26305600-26306200	Flanking Active TSS	Hela-S3	cervix
21	chr11:26305600-26306600	Active TSS	Brain Anterior Caudate	brain

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