Variant report
| Variant | rs72876907 |
|---|---|
| Chromosome Location | chr11:26327173-26327174 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
- TF binding region (count:1)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
(count:1 , 50 per page) page:
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| Variant related genes | Relation type |
|---|---|
| ANO3 | TF binding region |
rSNPs within LD-proxies of this variant (count:12)
| rs_ID | r2[population] |
|---|---|
| rs17308992 | 0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs2100820 | 0.83[AMR][1000 genomes];0.84[EUR][1000 genomes] |
| rs55642080 | 0.83[AMR][1000 genomes];0.84[EUR][1000 genomes] |
| rs56131609 | 0.81[AMR][1000 genomes];0.84[EUR][1000 genomes] |
| rs56347193 | 0.83[AMR][1000 genomes];0.84[EUR][1000 genomes] |
| rs72874951 | 0.81[AMR][1000 genomes];0.84[EUR][1000 genomes] |
| rs72874968 | 0.81[AMR][1000 genomes];0.83[EUR][1000 genomes] |
| rs72874981 | 0.81[AMR][1000 genomes];0.83[EUR][1000 genomes] |
| rs72874983 | 0.83[AMR][1000 genomes];0.84[EUR][1000 genomes] |
| rs72874987 | 0.86[AMR][1000 genomes];0.86[EUR][1000 genomes] |
| rs72876910 | 1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes] |
| rs72876916 | 0.87[EUR][1000 genomes] |
Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page:
1
| No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
|---|---|---|---|---|---|---|---|
| 1 | esv3425701 | chr11:26310425-26330495 | Enhancers Weak transcription | TF binding regionChromatin interactive region | 2 gene(s) | inside rSNPs | diseases |
| No data |
Chromatin state (count:0 , 50 per page) page:
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