Variant report

Variant	rs72880893
Chromosome Location	chr6:64254109-64254110
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 2 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:1)

rs_ID	r²[population]
rs72882724	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv981154	chr6:64253950-64260109	Strong transcription Weak transcription Enhancers	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	n/a

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:64249400-64258200	Weak transcription	Liver	Liver
2	chr6:64252400-64255000	Enhancers	Hela-S3	cervix
3	chr6:64252800-64258800	Weak transcription	HepG2	liver
4	chr6:64253200-64254200	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr6:64253400-64254400	Weak transcription	A549	lung
6	chr6:64254000-64254200	Enhancers	Psoas Muscle	Psoas

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links