The 2.0 version of rSNPBase

Variant report

Variant rs72883585
Chromosome Location chr2:181875369-181875370
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:181849400-181880000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
2 chr2:181851200-181876200 Weak transcription Brain Inferior Temporal Lobe brain
3 chr2:181856800-181897200 Weak transcription Primary B cells from cord blood blood
4 chr2:181857600-181879200 Weak transcription Fetal Muscle Trunk muscle
5 chr2:181857800-181901200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr2:181858200-181878000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr2:181860000-181894800 Weak transcription Primary hematopoietic stem cells blood
8 chr2:181864600-181879000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr2:181865600-181878000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr2:181867800-181881400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
11 chr2:181869400-181879800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr2:181870800-181875800 Weak transcription Fetal Brain Female brain
13 chr2:181871000-181875600 Weak transcription Brain Angular Gyrus brain
14 chr2:181871000-181878600 Weak transcription Aorta Aorta
15 chr2:181871000-181886600 Weak transcription Brain Hippocampus Middle brain
16 chr2:181871200-181880400 Weak transcription Skeletal Muscle Male skeletal muscle
17 chr2:181873000-181876600 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
18 chr2:181873200-181885000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr2:181873400-181875400 Weak transcription Brain Cingulate Gyrus brain
20 chr2:181873400-181875400 Weak transcription Fetal Lung lung
21 chr2:181873400-181875400 Weak transcription Stomach Mucosa stomach
22 chr2:181873400-181875400 Weak transcription K562 blood
23 chr2:181873400-181875600 Weak transcription Fetal Stomach stomach
24 chr2:181873400-181876000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
25 chr2:181873400-181876000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr2:181873400-181876000 Weak transcription Right Ventricle heart
27 chr2:181873400-181877600 Enhancers Pancreatic Islets Pancreatic Islet
28 chr2:181873400-181878000 Weak transcription Left Ventricle heart
29 chr2:181873400-181901000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
30 chr2:181873600-181875400 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr2:181873600-181875800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr2:181873600-181877200 Weak transcription Psoas Muscle Psoas
33 chr2:181873600-181877800 Weak transcription Ovary ovary
34 chr2:181873600-181878000 Weak transcription Gastric stomach
35 chr2:181873600-181882000 Weak transcription Pancreas Pancrea
36 chr2:181873600-181887800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
37 chr2:181873600-181889600 Weak transcription Colon Smooth Muscle Colon
38 chr2:181873800-181875400 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr2:181873800-181875800 Weak transcription NHLF lung
40 chr2:181874000-181875600 Weak transcription Rectal Smooth Muscle rectum
41 chr2:181875000-181875800 Enhancers iPS-20b Cell Line embryonic stem cell
42 chr2:181875000-181876600 Enhancers Cortex derived primary cultured neurospheres brain
43 chr2:181875000-181877000 Enhancers Brain Anterior Caudate brain
44 chr2:181875000-181877800 Enhancers Fetal Heart heart
45 chr2:181875200-181875400 Enhancers HUES64 Cell Line embryonic stem cell
46 chr2:181875200-181875400 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr2:181875200-181875400 Enhancers Primary T helper naive cells fromperipheralblood blood
48 chr2:181875200-181875400 Enhancers Brain Germinal Matrix brain
49 chr2:181875200-181875400 Enhancers Skeletal Muscle Female skeletal muscle
50 chr2:181875200-181875400 Enhancers A549 lung

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Last update: Aug 31, 2015