Variant report

Variant rs7289390
Chromosome Location chr22:20784550-20784551
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:109 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:20778200-20785400 Weak transcription HSMM muscle
2 chr22:20778600-20786200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr22:20778600-20789400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr22:20779000-20785000 Strong transcription Muscle Satellite Cultured Cells --
5 chr22:20779200-20784600 Strong transcription Breast Myoepithelial Primary Cells Breast
6 chr22:20779200-20785000 Weak transcription Left Ventricle heart
7 chr22:20779200-20785600 Strong transcription NHLF lung
8 chr22:20779400-20785200 Strong transcription Aorta Aorta
9 chr22:20779600-20789200 Weak transcription NHDF-Ad bronchial
10 chr22:20780600-20785200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
11 chr22:20780600-20785400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr22:20780800-20785000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
13 chr22:20780800-20785000 Strong transcription Right Atrium heart
14 chr22:20781400-20785600 Strong transcription Osteobl bone
15 chr22:20781600-20785000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr22:20782000-20786600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr22:20782400-20784800 Strong transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr22:20782600-20784800 Weak transcription Colon Smooth Muscle Colon
19 chr22:20783000-20784600 Genic enhancers iPS DF 19.11 Cell Line embryonic stem cell
20 chr22:20783000-20785200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr22:20783000-20785200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
22 chr22:20783000-20785200 Genic enhancers Spleen Spleen
23 chr22:20783000-20786200 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
24 chr22:20783200-20784600 Active TSS Brain Inferior Temporal Lobe brain
25 chr22:20783200-20784800 Active TSS Brain Hippocampus Middle brain
26 chr22:20783200-20785200 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
27 chr22:20783200-20785600 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
28 chr22:20783200-20786000 Flanking Bivalent TSS/Enh Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr22:20783200-20786200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
30 chr22:20783200-20786200 Enhancers Fetal Heart heart
31 chr22:20783200-20786600 Transcr. at gene 5' and 3' Foreskin Fibroblast Primary Cells skin02 Skin
32 chr22:20783400-20784800 Bivalent Enhancer Stomach Mucosa stomach
33 chr22:20783400-20785000 Genic enhancers Stomach Smooth Muscle stomach
34 chr22:20783400-20785600 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
35 chr22:20783400-20787200 Weak transcription HepG2 liver
36 chr22:20783400-20790000 Weak transcription HSMMtube muscle
37 chr22:20783600-20786800 Enhancers Lung lung
38 chr22:20783600-20789800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
39 chr22:20783800-20784600 Flanking Bivalent TSS/Enh Primary Natural Killer cells fromperipheralblood blood
40 chr22:20783800-20784600 Flanking Bivalent TSS/Enh Duodenum Mucosa Duodenum
41 chr22:20783800-20784800 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr22:20783800-20784800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
43 chr22:20783800-20785200 Flanking Bivalent TSS/Enh Primary T cells from cord blood blood
44 chr22:20783800-20785200 Bivalent/Poised TSS Duodenum Smooth Muscle Duodenum
45 chr22:20783800-20785200 Bivalent Enhancer Fetal Muscle Leg muscle
46 chr22:20783800-20785200 Flanking Bivalent TSS/Enh Rectal Mucosa Donor 31 rectum
47 chr22:20783800-20785400 Flanking Bivalent TSS/Enh Primary T cells fromperipheralblood blood
48 chr22:20783800-20785800 Flanking Bivalent TSS/Enh Primary hematopoietic stem cells G-CSF-mobilized Male --
49 chr22:20783800-20785800 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
50 chr22:20783800-20786200 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain

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