The 2.0 version of rSNPBase

Variant report

Variant rs72894575
Chromosome Location chr1:47643684-47643685
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:47638800-47644800 Weak transcription Ovary ovary
2 chr1:47640000-47644600 Weak transcription Right Atrium heart
3 chr1:47641200-47643800 Weak transcription Skeletal Muscle Female skeletal muscle
4 chr1:47641200-47644200 Weak transcription HUES6 Cell Line embryonic stem cell
5 chr1:47641200-47644200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:47641200-47644200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr1:47641200-47644400 Weak transcription H9 Cell Line embryonic stem cell
8 chr1:47641200-47644400 Weak transcription HUES48 Cell Line embryonic stem cell
9 chr1:47641200-47644400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
10 chr1:47641200-47644400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
11 chr1:47641200-47644400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:47641200-47644400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:47641200-47644400 Weak transcription Osteobl bone
14 chr1:47641200-47644600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr1:47641200-47644800 Weak transcription Liver Liver
16 chr1:47641200-47644800 Weak transcription Brain Substantia Nigra brain
17 chr1:47641400-47644200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
18 chr1:47641400-47644200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
19 chr1:47641400-47644200 Weak transcription Hela-S3 cervix
20 chr1:47641400-47644200 Weak transcription HSMM muscle
21 chr1:47641400-47644400 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr1:47641400-47644400 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr1:47641400-47644400 Weak transcription Adipose Nuclei Adipose
24 chr1:47641400-47644400 Weak transcription Brain Angular Gyrus brain
25 chr1:47641400-47644400 Weak transcription Spleen Spleen
26 chr1:47641400-47644600 Weak transcription Fetal Kidney kidney
27 chr1:47641600-47643800 Weak transcription K562 blood
28 chr1:47641600-47644000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
29 chr1:47641600-47644200 Weak transcription Brain Cingulate Gyrus brain
30 chr1:47641600-47644400 Weak transcription Brain Anterior Caudate brain
31 chr1:47641600-47644400 Weak transcription Brain Inferior Temporal Lobe brain
32 chr1:47641600-47644400 Weak transcription NHEK skin
33 chr1:47641600-47644600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
34 chr1:47641600-47645000 Weak transcription Fetal Lung lung
35 chr1:47641800-47644200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
36 chr1:47641800-47644400 Weak transcription HMEC breast
37 chr1:47641800-47644800 Weak transcription Brain Hippocampus Middle brain
38 chr1:47643000-47644400 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr1:47643400-47644400 Enhancers HepG2 liver
40 chr1:47643400-47644800 Weak transcription Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015