Variant report

Variant	rs74076314
Chromosome Location	chr1:47518048-47518049
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11488318	1.00[EUR][1000 genomes]
rs12085485	1.00[EUR][1000 genomes]
rs12092838	1.00[EUR][1000 genomes]
rs12096366	1.00[EUR][1000 genomes]
rs56311064	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs57765629	1.00[EUR][1000 genomes]
rs58921777	1.00[EUR][1000 genomes]
rs59550357	1.00[EUR][1000 genomes]
rs60589829	1.00[EUR][1000 genomes]
rs61502427	1.00[EUR][1000 genomes]
rs6684967	1.00[AMR][1000 genomes]
rs6690141	0.83[AMR][1000 genomes]
rs72886595	1.00[EUR][1000 genomes]
rs72894542	1.00[EUR][1000 genomes]
rs72894554	1.00[EUR][1000 genomes]
rs72894561	1.00[EUR][1000 genomes]
rs72894575	1.00[EUR][1000 genomes]
rs74073558	1.00[EUR][1000 genomes]
rs74073585	1.00[EUR][1000 genomes]
rs74073742	1.00[EUR][1000 genomes]
rs74073791	1.00[EUR][1000 genomes]
rs74073793	1.00[EUR][1000 genomes]
rs74073879	1.00[EUR][1000 genomes]
rs74073880	1.00[EUR][1000 genomes]
rs74076309	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74076312	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs74076315	1.00[EUR][1000 genomes]
rs74077366	1.00[EUR][1000 genomes]
rs9333021	1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1009338	chr1:47358532-47555253	Weak transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
2	esv2763300	chr1:47358532-47628774	Bivalent Enhancer Enhancers Weak transcription Flanking Active TSS Flanking Bivalent TSS/Enh Active TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	10 gene(s)	inside rSNPs	diseases
3	nsv916813	chr1:47435635-47666179	Enhancers Flanking Active TSS Weak transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription Active TSS Bivalent/Poised TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
4	nsv871717	chr1:47449486-47524264	Active TSS Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Enhancers Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
5	nsv461428	chr1:47487585-47524264	Flanking Active TSS Enhancers Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS Active TSS Weak transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv546167	chr1:47487585-47524264	Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:47513200-47518600	Weak transcription	Liver	Liver
2	chr1:47515400-47524000	Weak transcription	Aorta	Aorta
3	chr1:47516000-47523600	Weak transcription	Left Ventricle	heart

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