Variant report

Variant	rs7290885
Chromosome Location	chr22:33195910-33195911
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr22:32873449..32876014-chr22:33195387..33198121,2	MCF-7	breast:
2	22:32284948-32287956..22:33190123-33206921	K562	blood:
3	chr22:33193803..33196091-chr22:33197743..33200134,2	K562	blood:
4	22:32846948-32860159..22:33190123-33206921	K562	blood:
5	chr22:33195652..33199571-chr22:33200330..33212129,15	MCF-7	breast:

Variant related genes	Relation type
ENSG00000227813	Chromatin interaction
ENSG00000197047	Chromatin interaction
ENSG00000184459	Chromatin interaction
ENSG00000100225	Chromatin interaction

rs_ID	r²[population]
rs1005664	1.00[TSI][hapmap]
rs1894457	1.00[TSI][hapmap]
rs5998649	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs5998658	1.00[TSI][hapmap]
rs7286342	1.00[AMR][1000 genomes]
rs9619310	1.00[TSI][hapmap]
rs9619322	1.00[TSI][hapmap]

Chromatin state (count:54 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr22:33176800-33196600	Weak transcription	HUES48 Cell Line	embryonic stem cell
2	chr22:33185200-33197200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
3	chr22:33191400-33197000	Weak transcription	Fetal Intestine Small	intestine
4	chr22:33193000-33196200	Weak transcription	Fetal Kidney	kidney
5	chr22:33193000-33196600	Weak transcription	Left Ventricle	heart
6	chr22:33193000-33196800	Weak transcription	Brain Angular Gyrus	brain
7	chr22:33193000-33197200	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
8	chr22:33193200-33196000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
9	chr22:33193200-33196200	Weak transcription	NHLF	lung
10	chr22:33193200-33196600	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
11	chr22:33193200-33196600	Weak transcription	Fetal Muscle Trunk	muscle
12	chr22:33193200-33196600	Weak transcription	Right Ventricle	heart
13	chr22:33193200-33196800	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr22:33193200-33196800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
15	chr22:33193200-33196800	Weak transcription	Fetal Lung	lung
16	chr22:33193200-33197000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
17	chr22:33193200-33197000	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
18	chr22:33193200-33197000	Weak transcription	Liver	Liver
19	chr22:33193200-33197200	Weak transcription	Muscle Satellite Cultured Cells	--
20	chr22:33193200-33197200	Weak transcription	Brain Substantia Nigra	brain
21	chr22:33193200-33197200	Weak transcription	Esophagus	oesophagus
22	chr22:33193200-33197200	Weak transcription	Pancreas	Pancrea
23	chr22:33193400-33196000	Weak transcription	Colon Smooth Muscle	Colon
24	chr22:33193400-33196000	Weak transcription	Stomach Smooth Muscle	stomach
25	chr22:33193400-33196200	Weak transcription	Right Atrium	heart
26	chr22:33193400-33196200	Weak transcription	NHDF-Ad	bronchial
27	chr22:33193400-33196400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
28	chr22:33193400-33196800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
29	chr22:33193400-33196800	Weak transcription	HMEC	breast
30	chr22:33193400-33197000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr22:33193400-33197000	Weak transcription	Brain Inferior Temporal Lobe	brain
32	chr22:33193400-33197200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
33	chr22:33193400-33197200	Weak transcription	Brain Cingulate Gyrus	brain
34	chr22:33193600-33197000	Weak transcription	Brain Hippocampus Middle	brain
35	chr22:33193600-33197000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
36	chr22:33193800-33196000	Weak transcription	Osteobl	bone
37	chr22:33193800-33196800	Weak transcription	HepG2	liver
38	chr22:33194000-33196600	Weak transcription	Breast Myoepithelial Primary Cells	Breast
39	chr22:33195000-33197000	Enhancers	Placenta	Placenta
40	chr22:33195000-33197600	Enhancers	Placenta Amnion	Placenta Amnion
41	chr22:33195400-33196000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
42	chr22:33195400-33196800	Enhancers	HSMM	muscle
43	chr22:33195400-33197200	Enhancers	Fetal Muscle Leg	muscle
44	chr22:33195400-33197200	Enhancers	HSMMtube	muscle
45	chr22:33195600-33196200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
46	chr22:33195600-33196600	Enhancers	Adipose Nuclei	Adipose
47	chr22:33195600-33197000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr22:33195600-33197000	Enhancers	Fetal Stomach	stomach
49	chr22:33195600-33197200	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr22:33195600-33197200	Enhancers	Lung	lung

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