Variant report

Variant	rs72910713
Chromosome Location	chr1:56027355-56027356
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs13374717	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs13375461	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1499655	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1499656	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs58438899	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs60005212	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6697229	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72908685	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs72908697	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv10184	chr1:55728755-56084833	Enhancers Weak transcription Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56025800-56038400	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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