The 2.0 version of rSNPBase

Variant report

Variant rs72925658
Chromosome Location chr1:62164616-62164617
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:62126000-62165200 Weak transcription Brain Cingulate Gyrus brain
2 chr1:62135000-62165000 Weak transcription Brain Germinal Matrix brain
3 chr1:62136800-62173800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:62138800-62189600 Weak transcription Psoas Muscle Psoas
5 chr1:62140000-62189000 Weak transcription NHLF lung
6 chr1:62142800-62172200 Weak transcription Ovary ovary
7 chr1:62142800-62188600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr1:62143800-62165600 Weak transcription Stomach Mucosa stomach
9 chr1:62143800-62170200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr1:62144600-62164800 Weak transcription Fetal Brain Female brain
11 chr1:62144600-62165000 Weak transcription Brain Substantia Nigra brain
12 chr1:62144600-62165600 Weak transcription HepG2 liver
13 chr1:62145000-62164800 Weak transcription Brain Inferior Temporal Lobe brain
14 chr1:62145000-62165000 Weak transcription NH-A brain
15 chr1:62145000-62172200 Weak transcription Colonic Mucosa Colon
16 chr1:62145200-62167400 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr1:62146200-62190200 Weak transcription Placenta Amnion Placenta Amnion
18 chr1:62146400-62166000 Weak transcription Brain Angular Gyrus brain
19 chr1:62146600-62164800 Weak transcription Esophagus oesophagus
20 chr1:62146600-62165200 Weak transcription iPS-15b Cell Line embryonic stem cell
21 chr1:62146600-62166000 Weak transcription Rectal Smooth Muscle rectum
22 chr1:62147200-62164800 Weak transcription H9 Cell Line embryonic stem cell
23 chr1:62147600-62173400 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:62148000-62164800 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr1:62148400-62165200 Weak transcription Fetal Kidney kidney
26 chr1:62149600-62165000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
27 chr1:62150200-62164800 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr1:62150200-62164800 Weak transcription K562 blood
29 chr1:62150200-62165200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
30 chr1:62150200-62165200 Weak transcription Fetal Lung lung
31 chr1:62150200-62165600 Weak transcription Small Intestine intestine
32 chr1:62152400-62175200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:62154400-62165600 Weak transcription HMEC breast
34 chr1:62154800-62171600 Weak transcription Fetal Heart heart
35 chr1:62155400-62167400 Strong transcription Primary neutrophils fromperipheralblood blood
36 chr1:62155400-62167800 Strong transcription Primary monocytes fromperipheralblood blood
37 chr1:62155400-62167800 Strong transcription Primary B cells from peripheral blood blood
38 chr1:62155400-62169000 Strong transcription Monocytes-CD14+_RO01746 blood
39 chr1:62158600-62189800 Weak transcription Pancreas Pancrea
40 chr1:62158800-62164800 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr1:62159200-62167400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:62159200-62167600 Strong transcription Primary hematopoietic stem cells short term culture blood
43 chr1:62159200-62167600 Strong transcription Primary T helper cells fromperipheralblood blood
44 chr1:62159200-62167600 Strong transcription Adipose Nuclei Adipose
45 chr1:62159200-62167800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
46 chr1:62159400-62165600 Strong transcription Liver Liver
47 chr1:62159400-62165600 Weak transcription A549 lung
48 chr1:62159400-62168600 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
49 chr1:62160800-62167600 Strong transcription HUVEC blood vessel
50 chr1:62161000-62166800 Strong transcription Fetal Thymus thymus

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Last update: Aug 31, 2015