Variant report

Variant	rs72927560
Chromosome Location	chr1:71638235-71638236
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs17091044	1.00[AMR][1000 genomes]
rs17091070	1.00[AMR][1000 genomes]
rs57105774	1.00[AMR][1000 genomes]
rs59260746	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs72927588	1.00[AMR][1000 genomes]
rs72927592	1.00[AMR][1000 genomes]
rs72929513	1.00[AMR][1000 genomes]
rs72929516	1.00[AMR][1000 genomes]
rs72929542	1.00[AMR][1000 genomes]
rs72930543	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv870650	chr1:71590877-71642977	Flanking Active TSS Enhancers Weak transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv997782	chr1:71628776-71668906	Enhancers Weak transcription Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:71636200-71638600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr1:71637200-71639400	Weak transcription	Ovary	ovary

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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