The 2.0 version of rSNPBase

Variant report

Variant rs72930864
Chromosome Location chr2:55893017-55893018
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:55846800-55919800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr2:55847400-55911000 Weak transcription Placenta Amnion Placenta Amnion
3 chr2:55858200-55920400 Weak transcription Fetal Heart heart
4 chr2:55860400-55905400 Weak transcription Fetal Brain Male brain
5 chr2:55864000-55893200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr2:55864400-55919600 Weak transcription NHLF lung
7 chr2:55866600-55920000 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr2:55870400-55920000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr2:55870600-55920000 Weak transcription Rectal Smooth Muscle rectum
10 chr2:55870800-55893400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr2:55870800-55903600 Weak transcription Gastric stomach
12 chr2:55870800-55909000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
13 chr2:55870800-55920400 Weak transcription Aorta Aorta
14 chr2:55871000-55893200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr2:55871000-55893200 Weak transcription Thymus Thymus
16 chr2:55871000-55920000 Weak transcription Spleen Spleen
17 chr2:55871200-55893400 Weak transcription Brain Cingulate Gyrus brain
18 chr2:55871200-55905200 Weak transcription Brain Angular Gyrus brain
19 chr2:55871400-55905200 Weak transcription Fetal Kidney kidney
20 chr2:55873200-55893200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr2:55873200-55919800 Weak transcription Small Intestine intestine
22 chr2:55873800-55899400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr2:55874800-55920200 Weak transcription Pancreas Pancrea
24 chr2:55879000-55896200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr2:55879000-55917600 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr2:55879200-55902800 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr2:55879400-55914200 Strong transcription HUES64 Cell Line embryonic stem cell
28 chr2:55881200-55913000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr2:55881800-55898000 Weak transcription NHDF-Ad bronchial
30 chr2:55882000-55893400 Weak transcription Right Ventricle heart
31 chr2:55882000-55893400 Weak transcription Skeletal Muscle Male skeletal muscle
32 chr2:55882200-55909600 Weak transcription Brain Germinal Matrix brain
33 chr2:55883000-55893400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
34 chr2:55883000-55906800 Weak transcription Muscle Satellite Cultured Cells --
35 chr2:55883000-55919800 Weak transcription HSMMtube muscle
36 chr2:55883200-55893200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr2:55883200-55893400 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr2:55883200-55906600 Weak transcription Primary T killer memory cells from peripheral blood blood
39 chr2:55883400-55893400 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr2:55883400-55906800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
41 chr2:55883800-55897600 Weak transcription Brain Substantia Nigra brain
42 chr2:55884000-55897800 Weak transcription HMEC breast
43 chr2:55885600-55902600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
44 chr2:55886000-55896000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr2:55886600-55893200 Weak transcription Osteobl bone
46 chr2:55887400-55896000 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr2:55887600-55898400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
48 chr2:55887800-55900200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
49 chr2:55887800-55900400 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr2:55888000-55907200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015