Variant report

rSNPs within LD-proxies of this variant (count:29)

rs_ID	r²[population]
rs11568621	1.00[ASN][1000 genomes]
rs11568628	1.00[ASN][1000 genomes]
rs11568629	1.00[ASN][1000 genomes]
rs12275975	0.92[EUR][1000 genomes]
rs4077137	1.00[ASN][1000 genomes]
rs55743078	0.88[EUR][1000 genomes]
rs56052738	1.00[ASN][1000 genomes]
rs56057734	1.00[ASN][1000 genomes]
rs56192530	1.00[ASN][1000 genomes]
rs56238281	0.83[ASN][1000 genomes]
rs56306952	1.00[ASN][1000 genomes]
rs56406487	1.00[ASN][1000 genomes]
rs57350702	1.00[ASN][1000 genomes]
rs58244957	0.83[ASN][1000 genomes]
rs67381592	1.00[ASN][1000 genomes]
rs67406655	1.00[ASN][1000 genomes]
rs72931336	0.80[EUR][1000 genomes]
rs72931343	0.88[EUR][1000 genomes]
rs72931349	0.88[EUR][1000 genomes]
rs72931356	0.88[EUR][1000 genomes]
rs72931361	0.88[EUR][1000 genomes]
rs72931371	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs72931390	0.86[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs72931399	1.00[ASN][1000 genomes]
rs72933422	1.00[ASN][1000 genomes]
rs72933451	0.83[ASN][1000 genomes]
rs72933455	0.83[ASN][1000 genomes]
rs736342	1.00[ASN][1000 genomes]
rs947790	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:6 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532283	chr11:62201358-62863475	Enhancers Flanking Active TSS Genic enhancers Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	1433 gene(s)	inside rSNPs	diseases
2	nsv1041770	chr11:62610353-62871767	Enhancers Weak transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	263 gene(s)	inside rSNPs	diseases
3	esv34011	chr11:62652779-62993702	Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	28 gene(s)	inside rSNPs	diseases
4	esv3398747	chr11:62718001-62720549	Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
5	esv3347465	chr11:62718326-62720424	Weak transcription	n/a	n/a	inside rSNPs	diseases
6	esv3404091	chr11:62718676-62719974	Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:62714800-62726800	Weak transcription	Right Atrium	heart

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