Variant report

Variant	rs72942863
Chromosome Location	chr3:102190897-102190898
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs58003412	1.00[AMR][1000 genomes]
rs58987387	1.00[AMR][1000 genomes]
rs58997897	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs61021865	1.00[AMR][1000 genomes]
rs72942858	1.00[AMR][1000 genomes]
rs72942870	1.00[AMR][1000 genomes]
rs72942897	1.00[AMR][1000 genomes]
rs72942901	1.00[AMR][1000 genomes]
rs72944805	1.00[AMR][1000 genomes]
rs72944807	1.00[AMR][1000 genomes]
rs72944809	1.00[AMR][1000 genomes]
rs72944814	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1007340	chr3:102108954-102725099	Enhancers Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases
2	nsv536676	chr3:102108954-102725099	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS Active TSS Strong transcription ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	16 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:4 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:102185000-102193600	Weak transcription	Duodenum Mucosa	Duodenum
2	chr3:102185000-102193800	Weak transcription	Hela-S3	cervix
3	chr3:102188400-102194400	Weak transcription	Fetal Lung	lung
4	chr3:102190200-102191000	Enhancers	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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